Update H7N9 host synonyms

nextstrain · Oct 3, 2017 · 26ae998 · 26ae998
1 parent 459b57a
commit 26ae998
Showing 1 changed file with 4 additions and 2 deletions.
diff --git a/vdb/h7n9_upload.py b/vdb/h7n9_upload.py
@@ -306,8 +306,6 @@ def format_host(self, v):
                 v['host'] = "chicken"
             if v['host'] == "anasclypeata":
                 v['host'] = "duck"
-            if v['host'] == "chencanagica":
-                v['host'] = "goose"
             if v['host'] == "anasplatyrhynchos":
                 v['host'] = "duck"
             if v['host'] == "anassp.":
@@ -316,6 +314,10 @@ def format_host(self, v):
                 v['host'] = "duck"
             if v['host'] == "anasdiscors":
                 v['host'] = "duck"
+            if v['host'] == "goose":
+                v['host'] = "other_avian"
+            if v['host'] == "chencanagica":
+                v['host'] = "other_avian"
             if v['host'] == "passermontanus":
                 v['host'] = "other_avian"
             if v['host'] == "arenariainterpres":