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405 followers · 118 following · 212

Highlights

  • Arctic Code Vault Contributor
  • Pro

Organizations

@fhcrc @blab @jbloomlab @nextstrain @seattleflu

Pinned

  1. coaltrace

    Simulating genealogies using charged particles

    HTML 28 8

  2. dynamics-practical

    Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data

    27 20

  3. blab/blotter

    bedford lab research

    HTML 40 66

  4. sismid

    Pathogen evolution, selection and immunity

    Jupyter Notebook 26 18

  5. nextstrain/auspice

    Web app for visualizing pathogen evolution

    JavaScript 246 144

  6. nextstrain/augur

    Pipeline components for real-time phylodynamic analysis

    Python 168 91

1,341 contributions in the last year

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Contribution activity

January 2021

Created 95 commits in 10 repositories

Created a pull request in nextstrain/ncov that received 2 comments

Set weeks as pivot interval

Description of proposed changes This PR updates augur frequencies with --pivot-interval-units weeks to give finer resolution pivots. Merging this s…

+5 −0 • 2 comments
Opened 11 other pull requests in 4 repositories
Reviewed 2 pull requests in 1 repository
5 contributions in private repositories Jan 7 – Jan 26

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