Skip to content


  • Arctic Code Vault Contributor
  • Pro


@fhcrc @blab @jbloomlab @nextstrain @seattleflu


  1. Simulating genealogies using charged particles

    HTML 28 8

  2. Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data

    27 20

  3. bedford lab research

    HTML 40 66

  4. Pathogen evolution, selection and immunity

    Jupyter Notebook 26 18

  5. Web app for visualizing pathogen evolution

    JavaScript 246 144

  6. Pipeline components for real-time phylodynamic analysis

    Python 168 91

1,341 contributions in the last year

Feb Mar Apr May Jun Jul Aug Sep Oct Nov Dec Jan Mon Wed Fri

Contribution activity

January 2021

Created a pull request in nextstrain/ncov that received 2 comments

Set weeks as pivot interval

Description of proposed changes This PR updates augur frequencies with --pivot-interval-units weeks to give finer resolution pivots. Merging this s…

+5 −0 2 comments
Reviewed 2 pull requests in 1 repository
5 contributions in private repositories Jan 7 – Jan 26

Seeing something unexpected? Take a look at the GitHub profile guide.