Run H3N2 builds with segment-specific FASTA files and public titers.

nextstrain · Feb 7, 2018 · 0d54e13 · 0d54e13
1 parent 239aca5
commit 0d54e13
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/config.json b/config.json
@@ -33,7 +33,7 @@
             "lineage": ["h3n2", "h1n1pdm", "vic", "yam"],
             "segment": ["ha"],
             "resolution": ["3y", "6y", "12y"],
-            "prepare": "--sequences ../../../fauna/data/{lineage}.fasta --titers ../../../fauna/data/{lineage}_hi_titers.tsv --complete_frequencies",
+            "prepare": "--sequences ../../../fauna/data/{lineage}_{segment}.fasta --titers ../../../fauna/data/{lineage}_public_hi_cell_titers.tsv --complete_frequencies",
             "fauna": " --virus {virus} --segments {segment} --sequences --titers"
         },
         {