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Fix linting from a comment

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DO NOT MERGE yet: Discuss fixes of #164 #168 #169
Fix linting from a comment #145: Issue comment #301 (comment) created by lpantano
July 12, 2024 16:18 2s
July 12, 2024 16:18 2s
Adding peak-calling with Genrich (fix #108) and multi-mapping read analysis
Fix linting from a comment #144: Issue comment #331 (comment) created by lpantano
July 11, 2024 21:00 3s
July 11, 2024 21:00 3s
Update bedtools_genomecov image to use gnu sort
Fix linting from a comment #143: Issue comment #374 (comment) created by lindenb
July 5, 2024 09:51 2s
July 5, 2024 09:51 2s
Update bedtools_genomecov image to use gnu sort
Fix linting from a comment #142: Issue comment #374 (comment) created by JoseEspinosa
July 5, 2024 09:44 2s
July 5, 2024 09:44 2s
Update bedtools_genomecov image to use gnu sort
Fix linting from a comment #141: Issue comment #374 (comment) created by lindenb
July 5, 2024 08:59 3s
July 5, 2024 08:59 3s
Add line number when reporting errors in check_samplesheet.py
Fix linting from a comment #140: Issue comment #370 (comment) created by JoseEspinosa
July 5, 2024 08:45 3s
July 5, 2024 08:45 3s
New release please?
Fix linting from a comment #139: Issue comment #373 (comment) created by JoseEspinosa
July 5, 2024 08:44 2s
July 5, 2024 08:44 2s
Remove empty path components from output paths
Fix linting from a comment #138: Issue comment #372 (comment) created by siddharthab
July 4, 2024 16:25 2s
July 4, 2024 16:25 2s
Check for sample IDs characters in samplesheet and report line numbers when erroring
Fix linting from a comment #137: Issue comment #371 (comment) created by JoseEspinosa
July 4, 2024 15:30 3s
July 4, 2024 15:30 3s
Process terminated for an unknown reason (SLURM)
Fix linting from a comment #136: Issue comment #339 (comment) created by JoseEspinosa
July 4, 2024 08:34 3s
July 4, 2024 08:34 3s
question for constructing samplesheet
Fix linting from a comment #135: Issue comment #349 (comment) created by JoseEspinosa
July 4, 2024 08:24 3s
July 4, 2024 08:24 3s
Feature Request: call peaks for each replicate (diffbind), not only the merged data
Fix linting from a comment #134: Issue comment #367 (comment) created by JoseEspinosa
July 4, 2024 08:23 3s
July 4, 2024 08:23 3s
Please pin the version of the nf-validation plugin!
Fix linting from a comment #133: Issue comment #354 (comment) created by JoseEspinosa
July 4, 2024 08:15 3s
July 4, 2024 08:15 3s
Increase memory allocation for BEDTOOLS_GENOMECOV
Fix linting from a comment #132: Issue comment #344 (comment) created by JoseEspinosa
July 3, 2024 20:59 3s
July 3, 2024 20:59 3s
Error executing process > 'NFCORE_ATACSEQ:ATACSEQ:CUSTOM_DUMPSOFTWAREVERSIONS (1)'
Fix linting from a comment #131: Issue comment #330 (comment) created by JoseEspinosa
July 3, 2024 20:31 2s
July 3, 2024 20:31 2s
Feature Request: call peaks for each replicate (diffbind), not only the merged data
Fix linting from a comment #130: Issue comment #367 (comment) created by lindenb
July 3, 2024 20:31 3s
July 3, 2024 20:31 3s
Feature Request: call peaks for each replicate (diffbind), not only the merged data
Fix linting from a comment #129: Issue comment #367 (comment) created by JoseEspinosa
July 3, 2024 20:24 2s
July 3, 2024 20:24 2s
deprecated container formats
Fix linting from a comment #128: Issue comment #361 (comment) created by JoseEspinosa
July 3, 2024 20:19 3s
July 3, 2024 20:19 3s
Unable to join Slack channel
Fix linting from a comment #127: Issue comment #364 (comment) created by JoseEspinosa
July 3, 2024 15:25 2s
July 3, 2024 15:25 2s
Increase memory and use sort in bedtool_genomecov process when dealing with merged replicates
Fix linting from a comment #126: Issue comment #369 (comment) created by maxulysse
July 3, 2024 14:31 2s
July 3, 2024 14:31 2s
Increase memory and use sort in bedtool_genomecov process when dealing with merged replicates
Fix linting from a comment #125: Issue comment #369 (comment) created by JoseEspinosa
July 3, 2024 14:06 1s
July 3, 2024 14:06 1s
Remove lib library
Fix linting from a comment #124: Issue comment #353 (comment) created by JoseEspinosa
July 3, 2024 13:46 2s
July 3, 2024 13:46 2s
Get template v2.13.1 (get rid of lib)
Fix linting from a comment #123: Issue comment #356 (comment) created by JoseEspinosa
July 3, 2024 12:40 3s
July 3, 2024 12:40 3s
Improve website on parameters section Alignment Options for argument --save_unaligned
Fix linting from a comment #122: Issue comment #359 (comment) created by JoseEspinosa
July 3, 2024 10:55 3s
July 3, 2024 10:55 3s
Unable to join Slack channel
Fix linting from a comment #121: Issue comment #364 (comment) created by adoig-umass
July 1, 2024 14:16 2s
July 1, 2024 14:16 2s