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Pinned repositories

  1. jvarkit

    Java utilities for Bioinformatics

    Java 201 89

  2. makefile2graph

    Creates a graph of dependencies from GNU-Make; Output is a graphiz-dot file or a Gexf-XML file.

    C 241 36

  3. verticalize

    Simple tool to verticalize text delimited files.

    C 29 2

  4. jbwa

    Java Bindings (JNI) for bwa

    Java 17 11

  5. xslt-sandbox

    My xslt sandbox

    XSLT 26 16

854 contributions in the last year

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Contribution activity

October 2018

Created a pull request in samtools/htsjdk that received 5 comments

HttpUtils: set Method to HEAD for HttpUtils.getHeaders

Description Minor change: in httpUtils getHeaderField I set the Http-method to 'HEAD' instead of 'GET' in order to only fetch the header fields. I …

+39 −2 5 comments

Created an issue in samtools/htsjdk that received 15 comments

Question: SamReaderFactory + https + authentication

Not an issue but a question: I need to (random-) access some BAM files behind a https site with authentication. Is there any already-existing class…


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