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Implement circrna database annotation functionalities #149
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nictru
merged 10 commits into
dev
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138-implement-circrna-database-annotation-functionalities
Jun 18, 2024
Merged
Implement circrna database annotation functionalities #149
nictru
merged 10 commits into
dev
from
138-implement-circrna-database-annotation-functionalities
Jun 18, 2024
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mahesh-panchal
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Jun 18, 2024
nictru
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June 18, 2024 14:16
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This PR adds a parameter
annotation
which accepts the path to an additional samplesheet. This samplesheet can contain an arbitrary number of bed files provided by the circrna databases (circbase, circatlas, circbank, ...). The found circRNA locations are then compared with the database regions and annotated if a hit is found.