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nf-core/fetchngs v1.8 - Lithium Lungfish
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@drpatelh drpatelh released this 08 Nov 09:48
· 754 commits to master since this release
1.8
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Learn about vigilant mode.

[1.8] - 2022-11-08

Enhancements & fixes

  • #111 - Change input mimetype to csv
  • #114 - Final samplesheet is not created when --skip_fastq_download is provided
  • #118 - Allow input pattern validation for csv/tsv/txt
  • #119 - --force_sratools_download results in different fastq names compared to FTP download
  • #121 - Add tower.yml to render samplesheet as Report in Tower
  • Fetch SRR and DRR metadata from ENA API instead of NCBI API to bypass frequent breaking changes
  • Updated pipeline template to nf-core/tools 2.6
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