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Fix linting from a comment

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fix-linting.yml
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Multiple issues in the pipeline Fix linting from a comment #191: Issue comment #406 (comment) created by gevro
July 1, 2024 13:33 3s
July 1, 2024 13:33 3s
samplesheet input is not detecting entire values in sample column Fix linting from a comment #190: Issue comment #378 (comment) created by AdrijaK
May 30, 2024 11:24 3s
May 30, 2024 11:24 3s
bwameth pipeline skipping all bwameth steps when --fasta, --fasta_index, and --bwa_meth_index are provided. Fix linting from a comment #189: Issue comment #396 (comment) created by maxulysse
May 28, 2024 11:24 3s
May 28, 2024 11:24 3s
bwameth index creation fails Fix linting from a comment #188: Issue comment #352 (comment) created by LucaZanella15
May 24, 2024 18:24 2s
May 24, 2024 18:24 2s
Correct documentation to explain minimal inputs for bwa-meth subworkflow Fix linting from a comment #187: Issue comment #363 (comment) created by LucaZanella15
May 24, 2024 18:10 3s
May 24, 2024 18:10 3s
Error when providing a bwameth index (MethylSeq v2.4.0 and v2.5.0) Fix linting from a comment #186: Issue comment #353 (comment) created by oliviapetrillo
May 9, 2024 14:02 2s
May 9, 2024 14:02 2s
Important! Template update for nf-core/tools v2.14.0 Fix linting from a comment #185: Issue comment #398 (comment) created by nf-core-bot
May 9, 2024 11:42 2s
May 9, 2024 11:42 2s
bwameth index creation fails Fix linting from a comment #184: Issue comment #352 (comment) created by oliviapetrillo
May 8, 2024 17:37 3s
May 8, 2024 17:37 3s
How can I run pipeline using SLURM job submission function Fix linting from a comment #183: Issue comment #224 (comment) created by anijudy
April 21, 2024 23:38 2s
April 21, 2024 23:38 2s
Bump preseq Fix linting from a comment #182: Issue comment #390 (comment) created by ewels
April 15, 2024 09:01 24s
April 15, 2024 09:01 24s
samplesheet input is not detecting entire values in sample column Fix linting from a comment #181: Issue comment #378 (comment) created by CathyXD
April 15, 2024 00:58 2s
April 15, 2024 00:58 2s
bwameth pipeline skipping all bwameth steps when --fasta, --fasta_index, and --bwa_meth_index are provided. Fix linting from a comment #180: Issue comment #396 (comment) created by npatel-ah
April 12, 2024 19:03 3s
April 12, 2024 19:03 3s
Add CX report support from bismark_methylation_extractor Fix linting from a comment #179: Issue comment #372 (comment) created by cjfields
April 12, 2024 03:04 3s
April 12, 2024 03:04 3s
Empty .fasta file at beginning of Bismark alignment Fix linting from a comment #178: Issue comment #305 (comment) created by gfill88
April 11, 2024 21:09 3s
April 11, 2024 21:09 3s
Add CX report support from bismark_methylation_extractor Fix linting from a comment #177: Issue comment #372 (comment) created by cjfields
April 8, 2024 22:14 2s
April 8, 2024 22:14 2s
Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency Fix linting from a comment #176: Issue comment #394 (comment) created by cjfields
April 8, 2024 21:08 3s
April 8, 2024 21:08 3s
bwameth index creation fails Fix linting from a comment #175: Issue comment #352 (comment) created by drothen15
April 5, 2024 14:31 3s
April 5, 2024 14:31 3s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #174: Issue comment #388 (comment) created by MMJBerger
April 2, 2024 07:27 3s
April 2, 2024 07:27 3s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #173: Issue comment #388 (comment) created by FelixKrueger
April 1, 2024 12:46 2s
April 1, 2024 12:46 2s
Latest template merge completely broke dev branch (on AWS + Fusion) Fix linting from a comment #172: Issue comment #392 (comment) created by FelixKrueger
March 28, 2024 15:21 4s
March 28, 2024 15:21 4s
Latest template merge completely broke dev branch (on AWS + Fusion) Fix linting from a comment #171: Issue comment #392 (comment) created by edmundmiller
March 28, 2024 14:51 3s
March 28, 2024 14:51 3s
Latest template merge completely broke dev branch (on AWS + Fusion) Fix linting from a comment #170: Issue comment #392 (comment) created by FelixKrueger
March 28, 2024 11:04 3s
March 28, 2024 11:04 3s
Latest template merge completely broke dev branch (on AWS + Fusion) Fix linting from a comment #169: Issue comment #392 (comment) created by edmundmiller
March 27, 2024 14:45 3s
March 27, 2024 14:45 3s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #168: Issue comment #388 (comment) created by deep-buddingcoder
March 25, 2024 18:58 3s
March 25, 2024 18:58 3s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #167: Issue comment #388 (comment) created by deep-buddingcoder
March 25, 2024 17:53 2s
March 25, 2024 17:53 2s