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Msgf not working on AWS! #25
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What ever it is, it probably also applies to Luciphor which is also a jar |
Are you using the docker in AWS? |
Yes it is using docker. But AWS does not set workflow.containerengine Anyway, it needs to be tested and working for all configurations. |
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1nxf-scratch-dir ip-172-31-26-118.eu-west-1.compute.internal:/tmp/nxf.XXXXSM8v5U
Input file 'MSGFPlus.jar' could not be found (by searching on PATH). Either provide a full filepath or fix your PATH environment!
Error: File not found (the file 'MSGFPlus.jar
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