Merge pull request #381 from nf-core/default_institutional_config

change(config) use institutional config by default
nf-core · Aug 25, 2023 · a978a80 · a978a80
2 parents 16ae4ef + 4c277dd
commit a978a80
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -9,6 +9,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### Changed
 
+- Use institutional configs by default [#381](https://github.com/nf-core/rnafusion/pull/381)
+
 ### Fixed
 
 - Tail trimming for reverse reads [#379](https://github.com/nf-core/rnafusion/pull/379)

diff --git a/nextflow.config b/nextflow.config
@@ -137,11 +137,11 @@ try {
 
 // Load nf-core/rnafusion custom profiles from different institutions.
 // Warning: Uncomment only if a pipeline-specific instititutional config already exists on nf-core/configs!
-// try {
-//   includeConfig "${params.custom_config_base}/pipeline/rnafusion.config"
-// } catch (Exception e) {
-//   System.err.println("WARNING: Could not load nf-core/config/rnafusion profiles: ${params.custom_config_base}/pipeline/rnafusion.config")
-// }
+try {
+  includeConfig "${params.custom_config_base}/pipeline/rnafusion.config"
+} catch (Exception e) {
+  System.err.println("WARNING: Could not load nf-core/config/rnafusion profiles: ${params.custom_config_base}/pipeline/rnafusion.config")
+}
 
 
 profiles {