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Update all modules to use new functions.nf #591

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merged 5 commits into from
Apr 12, 2021
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github-actions bot commented Apr 10, 2021

nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 48b8bd4

+| ✅ 105 tests passed       |+
#| ❔  13 tests were ignored |#
!| ❗   5 tests had warnings |!

❗ Test warnings:

  • files_exist - File not found: environment.yml
  • files_exist - File not found: Dockerfile
  • nextflow_config - Config variable not found: process.container
  • readme - README did not have a Nextflow minimum version badge.
  • schema_params - Schema param config_profile_name not found from nextflow config

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 1.13.3
  • Run at 2021-04-10 20:25:53

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LGTM

but, tbh, I didn't go through every detail

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grst commented Apr 12, 2021

BTW, I am not a big fan of the way you indent lines and align = and //. It creates massive diffs where most lines are irrelevant and makes it really hard to review.

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No worries! Thanks muchly. You will have a chance to look at it all properly on the merge to master 😅

@drpatelh drpatelh merged commit 08894ac into nf-core:dev Apr 12, 2021
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drpatelh commented Apr 12, 2021

BTW, I am not a big fan of the way you indent lines and align = and //. It creates massive diffs where most lines are irrelevant and makes it really hard to review.

Oops. Sorry. I do things this way because it makes it easier to read the actual code? 😏

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grst commented Apr 12, 2021

We'll just need an autoformatter at some point 🤷

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2 participants