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Fix typo
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SPPearce committed May 7, 2024
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2 changes: 1 addition & 1 deletion nextflow_schema.json
Original file line number Diff line number Diff line change
Expand Up @@ -265,7 +265,7 @@
"description": "Turn on the joint germline variant calling for GATK haplotypecaller",
"help_text": "Uses all normal germline samples (as designated by `status` in the input csv) in the joint germline variant calling process."
},
"joint_tnhyplotyper2": {
"joint_tnhaplotyper2": {
"type": "boolean",
"fa_icon": "fas fa-angle-double-right",
"description": "TO-DO: Check if the following is OK: Runs tnhaplotyper2 in joint (multi-sample) mode for better concordance among variant calls of tumor samples from the same patient. tnhaplotyper2 outputs will be stored in a subfolder named with patient ID under `variant_calling/tnhaplotyper2/` folder. Only a single normal sample per patient is allowed. Tumor-only mode is also supported."
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