Skip to content

Latest commit

 

History

History
106 lines (74 loc) · 18.7 KB

graphic_design.md

File metadata and controls

106 lines (74 loc) · 18.7 KB
title subtitle
Graphic Design Guidelines
Templates, common images, and design-related content for nf-core.

Introduction

nf-core has a variety of recognisable images and other graphic designs for the community project. To help facilitate the identification of nf-core pipelines and related material, we provide here a variety of files that can be used for all nf-core-related content, such as pipeline logos, presentations, or workflow diagrams.

All files are released under various forms of 'open' licenses, meaning you can re-use and re-model as you see fit.

Logo

All information for the nf-core logo can be seen at the nf-core/logos GitHub repository and are released under the MIT license.

Type Logo Links
Main nf-core logo PNG
SVG
Adobe Illustrator .ai
Dark backgrounds PNG
SVG
Adobe Illustrator .ai
Monochrome - dark background PNG
SVG
Adobe Illustrator .ai
Square PNG
SVG
Adobe Illustrator .ai

The nf-core create command will generate a logo for your pipeline automatically. However, you can also do this yourself by visiting https://nf-co.re/logo/pipelinename, where pipelinename can be anything.

Please note that nf-core is a separate entity from Nextflow. You can find information about the Nextflow trademark with associated logo files at https://github.com/nextflow-io/trademark

Font & Colours

The font used in nf-core designs is Maven Pro Bold (700), available at Google Fonts, under the Open Font License.

The nf-core green colour is as follows:

  • RGB: 36,176,100
  • Hex: #24B064

Workflow Schematics

It is often useful to have simplified diagrams that outline the main functionality and steps of a pipeline. This helps new users get an overview of a workflow when visiting a pipeline webpage or repository for the first time.

Most workflow diagrams are made by hand using vector image editors such as the open-source Inkscape or commercial suites such as Adobe Illustrator. Useful tools for collaborative prototyping include Google Drawings or LucidChart. All examples and components below can be opened in these editors, and various parts borrowed and/or modified as necessary.

The components are also made available on bioicons, which offers extensions for Inkscape and draw.io to directly import them there.

Examples

See below for some examples of nf-core workflow schematics that can be re-used and modified for your own pipeline.

:::warning Please make sure to check for any attributions to be included within any derivative images, as defined by the corresponding license! We provide suggestions below. :::

Click the schematic image to see the original.

Workflow Example nf-core Pipeline License/Publication Suggested attribution
nf-core/sarek workflow nf-core/sarek From Garcia et al. (2020, F1000 Research) under a CC-BY 4.0 license.
nf-core/eager workflow simple nf-core/eager From Fellows Yates et al. (2021, PeerJ) under a CC-BY 4.0 license CC-BY 4.0. Design originally by Zandra Fagernäs
nf-core/eager workflow detailed nf-core/eager From Fellows Yates et al. (2021, PeerJ) under a MIT license
nf-core/dualrnaseq workflow nf-core/dualrnaseq By Regan Hayward under MIT license
nf-core/circrna workflow nf-core/circrna By Barry Digby under MIT license
nf-core/mag workflow nf-core/mag By Sabrina Krakau under MIT license CC-BY 4.0. Design originally by Zandra Fagernäs
nf-core/bactmap workflow nf-core/bactmap By Anthony Underwood under MIT license
nf-core/cutandrun workflow nf-core/cutandrun By Chris Cheshire under MIT license
nf-core/sarek subway nf-core/sarek By Maxime U Garcia under MIT license
nf-core/rnaseq metro map grey nf-core/rnaseq By Sarah Guinchard under MIT license
nf-core/isoseq metro map nf-core/isoseq By Sébastien Guizard under MIT license

Components

Some components that may be useful are shown below:

Object Description Link Source
Single FASTQ File Icon SVG
PNG
nf-core/sarek; under a CC-BY 4.0 license.
Multiple FASTQ File Icon SVG
PNG
nf-core/sarek; under a CC-BY 4.0 license.
Single BAM File Icon SVG
PNG
nf-core/sarek; under a CC-BY 4.0 license.
Multiple BAM File Icon SVG
PNG
nf-core/sarek; under a CC-BY 4.0 license.
Multiple VCF File Icon SVG
PNG
nf-core/sarek; under a CC-BY 4.0 license.

Component Cheatsheets

Object Description Link Source
Components for a metro-map style pipeline workflow SVG
PDF
James A. Fellows Yates & nf-core; under a CC0 license (public domain)

Use draw.io

The web app draw.io helps you create, render and export different diagrams including metro-maps. For even more convenience you can use the following asset library nf-core xml item library. It contains all of the components from the cheatsheet above. To import it to draw.io use "File / Open library from / URL..." and paste:

https://github.com/LouisLeNezet/phaseimpute/raw/dev/docs/NfCore_library.xml

Additionally, the components can be used via bioicons.