add gather out

sourmash.md

@@ -189,4 +189,42 @@ curl -O -L https://github.com/ngs-docs/2017-lapaz-assembly/raw/master/_images/sh
 sourmash sbt_gather -k 31 genbank-k31.sbt.json shakya-unaligned-contigs.sig
 ```
 
+This should yield:
+```
+# running sourmash subcommand: sbt_gather
+loaded query: mqc500.QC.AMBIGUOUS.99.unalign... (k=31, DNA)
+
+overlap    p_query p_genome
+-------    ------- --------
+1.4 Mbp   11.0%     58.0%      JANA01000001.1 Fusobacterium sp. OBRC1 c
+1.0 Mbp    7.7%     25.9%      CP001957.1 Haloferax volcanii DS2 plasmi
+0.9 Mbp    7.5%     11.8%      BA000019.2 Nostoc sp. PCC 7120 DNA, comp
+0.7 Mbp    5.9%     23.0%      FOVK01000036.1 Proteiniclasticum ruminis
+0.7 Mbp    5.3%     17.6%      AE017285.1 Desulfovibrio vulgaris subsp.
+0.6 Mbp    4.9%     11.1%      CP001252.1 Shewanella baltica OS223, com
+0.6 Mbp    4.8%     27.3%      AP008226.1 Thermus thermophilus HB8 geno
+0.6 Mbp    4.4%     11.2%      CP000031.2 Ruegeria pomeroyi DSS-3, comp
+480.0 kbp   3.8%      7.6%      CP000875.1 Herpetosiphon aurantiacus DSM
+410.0 kbp   3.3%     10.5%      CH959317.1 Sulfitobacter sp. NAS-14.1 sc
+1.4 Mbp   10.9%     11.8%      LN831027.1 Fusobacterium nucleatum subsp
+0.5 Mbp    4.1%      5.3%      CP000753.1 Shewanella baltica OS185, com
+420.0 kbp   3.3%      7.7%      FNDZ01000023.1 Proteiniclasticum ruminis
+150.0 kbp   1.2%      4.5%      CP015081.1 Deinococcus radiodurans R1 ch
+150.0 kbp   1.2%      8.2%      CP000969.1 Thermotoga sp. RQ2, complete
+290.0 kbp   2.3%      4.1%      CH959311.1 Sulfitobacter sp. EE-36 scf_1
+1.2 Mbp    9.4%      5.0%      CP013328.1 Fusobacterium nucleatum subsp
+110.0 kbp   0.9%      3.5%      FREL01000833.1 Enterococcus faecalis iso
+0.6 Mbp    5.0%      2.8%      CP000527.1 Desulfovibrio vulgaris DP4, c
+340.0 kbp   2.7%      3.3%      KQ235732.1 Fusobacterium nucleatum subsp
+70.0 kbp   0.6%      1.2%      CP000850.1 Salinispora arenicola CNS-205
+60.0 kbp   0.5%      0.7%      CP000270.1 Burkholderia xenovorans LB400
+50.0 kbp   0.4%      2.6%      CP001080.1 Sulfurihydrogenibium sp. YO3A
+50.0 kbp   0.4%      3.2%      L77117.1 Methanocaldococcus jannaschii D
+found less than 40.0 kbp in common. => exiting
+
+found 24 matches total;
+the recovered matches hit 73.4% of the query
+
+```
+
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