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[MRG] Nans in view connectome #2166
Merged
kchawla-pi
merged 3 commits into
nilearn:master
from
jeromedockes:nans_in_view_connectome
Oct 10, 2019
Merged
[MRG] Nans in view connectome #2166
kchawla-pi
merged 3 commits into
nilearn:master
from
jeromedockes:nans_in_view_connectome
Oct 10, 2019
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Is this for the alpha or the beta? |
Is this for the alpha or the beta?
whichever
|
Codecov Report
@@ Coverage Diff @@
## master #2166 +/- ##
==========================================
+ Coverage 92.31% 92.31% +<.01%
==========================================
Files 149 149
Lines 18781 18786 +5
Branches 2290 2291 +1
==========================================
+ Hits 17337 17342 +5
Misses 922 922
Partials 522 522
Continue to review full report at Codecov.
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bthirion
approved these changes
Oct 10, 2019
kchawla-pi
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Oct 12, 2019
…nt_modify_fetch_dev * 'master' of https://github.com/nilearn/nilearn: (228 commits) [MRG] Nans in view connectome (nilearn#2166) [MRG] FIX: orientation problem with plot_glass_brain (nilearn#1888) Import HTMLDocument in its original module to preserve backwards compatibility (nilearn#2162) Fixing malfunctioning allowed-failure section in Travis (nilearn#2160) Update Brainomics fetcher (nilearn#2097) Remove inplace modification in signal.clean (nilearn#2125) Iter age group prediction example (nilearn#2063) Expose bg_img, vmin and vmax in plot_img signature (nilearn#2157) Replac conda with pip in TravisCI setup (nilearn#2141) Core devs doc and add @emdupre (nilearn#2151) Add check for vmin, vmax in plot_surf_roi (nilearn#2052) [ENH] Initial visual reports (nilearn#2019) Renamed test to deduplicate name (nilearn#2144) Fixes nilearn#2029 Handle gzip files without extensions (nilearn#2126) Update Schaefer parcelation to v0.14.3 (nilearn#2138) MAINT: Future-compatible cmap reversal (nilearn#2131) fix openmp crash (nilearn#2140) change nose to pytest on appveyor (nilearn#2130) adding fix to whatsnew fix wrong urls in nki dataset ... # Conflicts: # nilearn/datasets/func.py
kchawla-pi
added a commit
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Oct 14, 2019
* 'master' of github.com:nilearn/nilearn: Fix cache mixin tests (nilearn#2161) Do not fail if metadata cannot be updated for an image (nilearn#2167) [MRG] Nans in view connectome (nilearn#2166)
kchawla-pi
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Oct 14, 2019
…ecomposition * 'master' of https://github.com/nilearn/nilearn: Fix Flake8 errors overlooked when merging PR nilearn#2028 (Plot connectome strength) (nilearn#2174) ENH: add connectome strength plot (nilearn#2028) Fix cache mixin tests (nilearn#2161) Do not fail if metadata cannot be updated for an image (nilearn#2167) [MRG] Nans in view connectome (nilearn#2166)
kchawla-pi
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that referenced
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Oct 18, 2019
…smooth-image * 'master' of https://github.com/nilearn/nilearn: (114 commits) [DOC] Update whats_new to reference nilearn#2013 (Merging of several examples) (nilearn#2183) Removed sub-example due to unfit for lasso dataset - unstable float values (nilearn#2177) Fix Flake8 errors overlooked when merging PR nilearn#2028 (Plot connectome strength) (nilearn#2174) ENH: add connectome strength plot (nilearn#2028) Fix cache mixin tests (nilearn#2161) Do not fail if metadata cannot be updated for an image (nilearn#2167) [MRG] Nans in view connectome (nilearn#2166) [MRG] FIX: orientation problem with plot_glass_brain (nilearn#1888) Import HTMLDocument in its original module to preserve backwards compatibility (nilearn#2162) Fixing malfunctioning allowed-failure section in Travis (nilearn#2160) Update Brainomics fetcher (nilearn#2097) Remove inplace modification in signal.clean (nilearn#2125) Iter age group prediction example (nilearn#2063) Expose bg_img, vmin and vmax in plot_img signature (nilearn#2157) Replac conda with pip in TravisCI setup (nilearn#2141) Core devs doc and add @emdupre (nilearn#2151) Add check for vmin, vmax in plot_surf_roi (nilearn#2052) [ENH] Initial visual reports (nilearn#2019) Renamed test to deduplicate name (nilearn#2144) Fixes nilearn#2029 Handle gzip files without extensions (nilearn#2126) ...
kchawla-pi
added a commit
to kchawla-pi/nilearn
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Oct 24, 2019
…te-req-dev * 'master' of https://github.com/nilearn/nilearn: (336 commits) Release Nilearn 0.6.0 alpha (nilearn#2164) Making fetch_localizer_button_task backwards compatibile (nilearn#2182) [DOC] Update whats_new to reference nilearn#2013 (Merging of several examples) (nilearn#2183) Removed sub-example due to unfit for lasso dataset - unstable float values (nilearn#2177) Fix Flake8 errors overlooked when merging PR nilearn#2028 (Plot connectome strength) (nilearn#2174) ENH: add connectome strength plot (nilearn#2028) Fix cache mixin tests (nilearn#2161) Do not fail if metadata cannot be updated for an image (nilearn#2167) [MRG] Nans in view connectome (nilearn#2166) [MRG] FIX: orientation problem with plot_glass_brain (nilearn#1888) Import HTMLDocument in its original module to preserve backwards compatibility (nilearn#2162) Fixing malfunctioning allowed-failure section in Travis (nilearn#2160) Update Brainomics fetcher (nilearn#2097) Remove inplace modification in signal.clean (nilearn#2125) Iter age group prediction example (nilearn#2063) Expose bg_img, vmin and vmax in plot_img signature (nilearn#2157) Replac conda with pip in TravisCI setup (nilearn#2141) Core devs doc and add @emdupre (nilearn#2151) Add check for vmin, vmax in plot_surf_roi (nilearn#2052) [ENH] Initial visual reports (nilearn#2019) ...
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nilearn.plotting.view_connectome
now converts NaNs in the adjacency matrix to 0.