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Loop over preprocessed and various denoised files.
Extract confounds from the input image (in MNI152NLin6Asym space)
Global signal
CSF
WM
FD
DVARS
Warp carpet dseg from MNI152NLin2009cAsym to MNI152NLin6Asym.
Just use carpet dseg for the carpet plot? Not sure if I want to go through the effort of collecting the crown mask and compcor mask from fMRIPrep (assuming they're written out).
What would you like to see added in this software?
The report will be pretty short if the only figure in there is the MELODIC components image.
Do you have any interest in helping implement the feature?
Yes
Additional information / screenshots
No response
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