Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Image segmentation needs more testing #192

Open
bthirion opened this issue Jul 1, 2012 · 4 comments
Open

Image segmentation needs more testing #192

bthirion opened this issue Jul 1, 2012 · 4 comments
Assignees

Comments

@bthirion
Copy link
Contributor

bthirion commented Jul 1, 2012

The example in
examples/tissue_classification.py
does not work e.g. on the following image:
nipy/data/neurospin/sulcal2000/nobias_ammon.nii.gz

@ghost ghost assigned alexis-roche Jul 1, 2012
@alexis-roche
Copy link
Member

You need to provide a skull-stripped image.

On Sun, Jul 1, 2012 at 11:39 PM, bthirion
reply@reply.github.com
wrote:

The example in
examples/tissue_classification.py
does not work e.g. on the following image:
nipy/data/neurospin/sulcal2000/nobias_ammon.nii.gz


Reply to this email directly or view it on GitHub:
#192

Siemens - Biomedical Imaging Center (CIBM)
1015 Lausanne, Switzerland
Phone: +41 21 693 0582
https://sites.google.com/site/alexisroche

@bthirion
Copy link
Contributor Author

bthirion commented Jul 1, 2012

In that case, we should provide one in nipy-data.

@matthew-brett
Copy link
Member

@alexis-roche - any news on licensing of the brainweb image?

@alexis-roche
Copy link
Member

Sorry, I haven't got a chance to deal with that. Let me see if I can generate a skull stripped image from one of the T1 images already included in nipy-data. Keep you posted asap.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants