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uxm plot is not recognized as a valid command #7

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ryancey1 opened this issue Jan 27, 2023 · 5 comments
Open

uxm plot is not recognized as a valid command #7

ryancey1 opened this issue Jan 27, 2023 · 5 comments

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@ryancey1
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Anyone else getting this error when using uxm plot?

$ uxm plot
Invalid command: plot
did you mean plot?
UXM deconvolution tool, version 0.1.0

Usage: uxm <command> [<args>]
run uxm <command> -h for more information
Optional commands:

deconv
build
plot
heatmap
test
binary
@MSleeper1
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I am getting the same error when I try to use plot. Did you find a solution to this?

$ uxm plot output.csv -o output.pdf
Invalid command: plot
did you mean plot?
UXM deconvolution tool, version 0.1.0

Usage: uxm <command> [<args>]
run uxm <command> -h for more information
Optional commands:

deconv
build
plot
heatmap
test
binary

@MSleeper1
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MSleeper1 commented May 7, 2023

Strangely, this problem seemed to fix itself as I was trying to troubleshoot it. I am honestly not sure what change resolved the issue, but uxm plot is now being recognized as a command.

Thank you for your continued work on this and your other great programs.

@AndriesDeKoker
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AndriesDeKoker commented May 16, 2023

I had the same error when matplotlib was not installed

But I got an error 'AttributeError: 'DataFrame' object has no attribute 'append'. Did you mean: '_append'?' which was due to pandas version higher then 1.5.3

@syx4097
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syx4097 commented Jul 13, 2023

I got the same error, and it has been solved by installing matplotlib.

@MinS1
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MinS1 commented Apr 1, 2024

Strangely, this problem seemed to fix itself as I was trying to troubleshoot it. I am honestly not sure what change resolved the issue, but uxm plot is now being recognized as a command.

Thank you for your continued work on this and your other great programs.

How did you solve this problem? I had the same problem. For any command, invalid is displayed. I'm confused. Hope to get your help. Thank you!

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5 participants