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Releases: nmdp-bioinformatics/py-ard

Supports WHO and exon Reduction Types

24 Sep 15:45
2a39491
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  • Handle cases when there is no typing and when redux fails.
  • added exon resolution group
  • added W resolution group
  • Fix validation issues with empty alleles, NNNNs, and non-allelic values.
  • pyard-import can refresh MACs and rebuild databases

handle invalid/blank input

29 Jul 13:53
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handle cases with no input and redux fails

updates to pyard-reduce-csv and unit tests

17 Jun 19:57
cb5a0ab
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Use pyard-reduce-csv command to reduce a CSV file based on a JSON config file.
Use db_version 3440 in unit test to match behave tests
Re-run the tests again so local db is used.

DRBX Mapping and Cw Serology

16 Jun 19:03
853abf9
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  • Map DRB3, DRB4 and DRB5 typings to DRBX. #82
  • Change C to Cw for serology; #84
  • Return '' for invalid MACs #84

0.6.3 release

09 Jun 18:55
8c75898
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addresses one-to-many relationship from 2d to lg/lgx

Fixes serology mappings for broad to include alleles in the split

07 Jun 18:59
fbd7cd7
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Fixes serology mappings for broad to include alleles in the split.

V2 to V3 Mapping

04 Feb 18:02
923f95b
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  • Heuristically predict V3 from V2 when not in exceptional case list
  • Make is_XX a public method on the ARD object
  • Update README and fix bug in pyard-import for importing into Latest

Nomenclature versioning

08 Dec 15:47
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adds nomenclature versioning, cmdline options, GL string examples

fix mac expansion

30 Nov 05:18
5d7d42b
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Fix serology mapping and mac expansions

Upgrade Pandas to 1.1.4

03 Nov 15:18
f423251
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Update pandas 1.1.4

  • Pandas 1.1.2 doesn't work with Python 3.9. Upgrade Pandas to 1.1.4 which works with Python 3.8 and 3.9