-
Notifications
You must be signed in to change notification settings - Fork 20
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Unable to install Citrus #107
Comments
Have you installed XQuartz? |
Hi Thanks a lot, after installing Xquartz, I could get citrus. However when I am trying to launch using command > citrus.launchUI() |
That looks like it’s functioning correctly. Please follow the usage guide for directions on how to proceed: https://github.com/nolanlab/citrus/wiki/Getting-Started#Starting_a_Citrus_analysis https://github.com/nolanlab/citrus/wiki/Getting-Started#Starting_a_Citrus_analysis
|
After installing all the prerequisite module as asked when I finally tried installing Citrus in R
** libs
c++ -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I../inst/include -fPIC -mtune=core2 -g -O2 -c upsample.cc -o upsample.o
c++ -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o citrus.so upsample.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.0/Resources/library/citrus/libs
** R
** inst
** preparing package for lazy loading
Error : .onLoad failed in loadNamespace() for 'rgl', details:
call: dyn.load(file, DLLpath = DLLpath, ...)
error: unable to load shared object '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rgl/libs/rgl.so':
dlopen(/Library/Frameworks/R.framework/Versions/3.0/Resources/library/rgl/libs/rgl.so, 6): Library not loaded: /usr/X11/lib/libGLU.1.dylib
Referenced from: /Library/Frameworks/R.framework/Versions/3.0/Resources/library/rgl/libs/rgl.so
Reason: image not found
Error : package ‘flowCore’ could not be loaded
ERROR: lazy loading failed for package ‘citrus’
Error: Command failed (1)"
Can I anyone help me in resolving the issue
The text was updated successfully, but these errors were encountered: