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error in starting enroot container for gromacs:2020.2 on v100 cards #47

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KapilS25 opened this issue Dec 24, 2020 · 5 comments
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@KapilS25
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Getting below mentioned error for : enroot start --rw gromacs:2020.2

nvidia-container-cli: mount error: stat failed: /dev/nvidia-modeset: no such file or directory
[ERROR] /home/apps/centos7/enroot/3.2.0/etc/enroot/hooks.d/98-nvidia.sh exited with return code 1

Checked with the solution provided at : #15
Setting NVIDIA_DRIVER_CAPABILITIES=utility gives another error

ERROR Failed to verify GPU driver: GPU driver verification failed: Failed to parse host GPU driver version Malformed version:
FATAL Please double check that GPU passthrough is enabled: --nv (Singularity), --gpus all (Docker)

GPU Info : Name : Tesla V100 Driver Version: 450.51.05 CUDA Version: 11.0

@3XX0
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3XX0 commented Dec 25, 2020

Looks like a problem with the entrypoint of the image, you can use --rc to bypass it in the meantime.
@AdamSimpson any idea what's going on?

@3XX0
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3XX0 commented Jan 15, 2021

Did you manage to solve the issue?

@KapilS25
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KapilS25 commented Jan 15, 2021

Issue still persist.
We switched from gromacs 2020.2 to gromacs 2018.2, working fine.

@AdamSimpson
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It looks like you're missing the compute capability in the workaround. Can you please set NVIDIA_DRIVER_CAPABILITIES=utility,compute and try again?

This issue has been resolved internally and will be present in the next gromacs NGC release, thanks for reporting.

@KapilS25 KapilS25 closed this as completed Mar 9, 2021
@KapilS25
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KapilS25 commented Mar 9, 2021

Resolved.

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