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environment.yaml
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environment.yaml
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name: snakemake
channels:
- conda-forge
- bioconda
- anaconda
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- abseil-cpp=20211102.0=h27087fc_1
- aioeasywebdav=2.4.0=pyha770c72_0
- aiohttp=3.8.1=py310h5764c6d_1
- aiosignal=1.2.0=pyhd8ed1ab_0
- amply=0.1.5=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- arrow=1.2.2=pyhd8ed1ab_0
- async-timeout=4.0.2=pyhd8ed1ab_0
- attmap=0.13.2=pyhd8ed1ab_0
- attrs=22.1.0=pyh71513ae_1
- backports=1.0=py_2
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- bcrypt=3.2.2=py310h5764c6d_0
- binaryornot=0.4.4=py_1
- boto3=1.24.44=pyhd8ed1ab_0
- botocore=1.27.45=pyhd8ed1ab_0
- brotlipy=0.7.0=py310h5764c6d_1004
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.6.15=ha878542_0
- cachetools=5.0.0=pyhd8ed1ab_0
- certifi=2022.6.15=py310hff52083_0
- cffi=1.15.1=py310h255011f_0
- chardet=5.0.0=py310hff52083_0
- charset-normalizer=2.1.0=pyhd8ed1ab_0
- click=8.1.3=py310hff52083_0
- cloudpickle=2.1.0=pyhd8ed1ab_0
- coin-or-cbc=2.10.8=h3786ebc_0
- coin-or-cgl=0.60.6=h6f57e76_1
- coin-or-clp=1.17.7=hc56784d_1
- coin-or-osi=0.108.7=h2720bb7_1
- coin-or-utils=2.11.6=h202d8b1_1
- coincbc=2.10.8=0_metapackage
- commonmark=0.9.1=py_0
- configargparse=1.5.3=pyhd8ed1ab_0
- connection_pool=0.0.3=pyhd3deb0d_0
- cookiecutter=2.1.1=pyh6c4a22f_0
- cryptography=37.0.4=py310h597c629_0
- cytoolz=0.12.0=py310h5764c6d_0
- dask-core=2022.7.1=pyhd8ed1ab_0
- dask-jobqueue=0.7.4=pyhd8ed1ab_0
- dataclasses=0.8=pyhc8e2a94_3
- datrie=0.8.2=py310h6acc77f_3
- decorator=5.1.1=pyhd8ed1ab_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- distributed=2022.7.1=pyhd8ed1ab_0
- docutils=0.19=py310hff52083_0
- dpath=2.0.6=py310hff52083_1
- dropbox=11.33.0=pyhd8ed1ab_0
- filechunkio=1.8=py_2
- filelock=3.7.1=pyhd8ed1ab_0
- frozenlist=1.3.1=py310h5764c6d_0
- fsspec=2022.7.1=pyhd8ed1ab_0
- ftputil=5.0.4=pyhd8ed1ab_0
- future=0.18.2=py310hff52083_5
- gitdb=4.0.9=pyhd8ed1ab_0
- gitpython=3.1.27=pyhd8ed1ab_0
- google-api-core=2.8.2=pyhd8ed1ab_0
- google-api-python-client=2.55.0=pyhd8ed1ab_0
- google-auth=2.9.1=pyh6c4a22f_0
- google-auth-httplib2=0.1.0=pyhd8ed1ab_1
- google-cloud-core=2.3.2=pyhd8ed1ab_0
- google-cloud-storage=2.4.0=pyh6c4a22f_0
- google-crc32c=1.1.2=py310he8fe98e_3
- google-resumable-media=2.3.3=pyhd8ed1ab_0
- googleapis-common-protos=1.56.4=py310hff52083_0
- grpc-cpp=1.48.0=hbd84cd8_0
- grpcio=1.48.0=py310ha0b7d45_0
- heapdict=1.0.1=py_0
- httplib2=0.20.4=pyhd8ed1ab_0
- idna=3.3=pyhd8ed1ab_0
- importlib-metadata=4.11.4=py310hff52083_0
- importlib_resources=5.9.0=pyhd8ed1ab_0
- iniconfig=1.1.1=pyh9f0ad1d_0
- jinja2=3.1.2=pyhd8ed1ab_1
- jinja2-time=0.2.0=pyhd8ed1ab_3
- jmespath=1.0.1=pyhd8ed1ab_0
- jsonschema=4.9.1=pyhd8ed1ab_0
- jupyter_core=4.11.1=py310hff52083_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- libblas=3.9.0=15_linux64_openblas
- libcblas=3.9.0=15_linux64_openblas
- libcrc32c=1.1.2=h9c3ff4c_0
- libffi=3.4.2=h7f98852_5
- libgcc-ng=12.1.0=h8d9b700_16
- libgfortran-ng=12.1.0=h69a702a_16
- libgfortran5=12.1.0=hdcd56e2_16
- libgomp=12.1.0=h8d9b700_16
- liblapack=3.9.0=15_linux64_openblas
- liblapacke=3.9.0=15_linux64_openblas
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.20=pthreads_h78a6416_1
- libprotobuf=3.20.1=h6239696_0
- libsodium=1.0.18=h36c2ea0_1
- libstdcxx-ng=12.1.0=ha89aaad_16
- libuuid=2.32.1=h7f98852_1000
- libzlib=1.2.12=h166bdaf_2
- locket=1.0.0=pyhd8ed1ab_0
- logmuse=0.2.6=pyh8c360ce_0
- markupsafe=2.1.1=py310h5764c6d_1
- msgpack-python=1.0.4=py310hbf28c38_0
- multidict=6.0.2=py310h5764c6d_1
- nbformat=5.4.0=pyhd8ed1ab_0
- ncurses=6.3=h27087fc_1
- numpy=1.23.1=py310h53a5b5f_0
- oauth2client=4.1.3=py_0
- openssl=1.1.1q=h166bdaf_0
- packaging=21.3=pyhd8ed1ab_0
- pandas=1.4.3=py310h769672d_0
- paramiko=2.11.0=pyhd8ed1ab_0
- partd=1.2.0=pyhd8ed1ab_0
- peppy=0.32.0=pyhd8ed1ab_1
- pip=22.2.2=pyhd8ed1ab_0
- pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
- plac=1.3.5=pyhd8ed1ab_0
- pluggy=1.0.0=py310hff52083_3
- ply=3.11=py_1
- prettytable=3.3.0=pyhd8ed1ab_0
- protobuf=3.20.1=py310hd8f1fbe_0
- psutil=5.9.1=py310h5764c6d_0
- pulp=2.6.0=py310hff52083_1
- py=1.11.0=pyh6c4a22f_0
- pyasn1=0.4.8=py_0
- pyasn1-modules=0.2.7=py_0
- pycparser=2.21=pyhd8ed1ab_0
- pygments=2.12.0=pyhd8ed1ab_0
- pynacl=1.5.0=py310h5764c6d_1
- pyopenssl=22.0.0=pyhd8ed1ab_0
- pyparsing=3.0.9=pyhd8ed1ab_0
- pyrsistent=0.18.1=py310h5764c6d_1
- pysftp=0.2.9=py_1
- pysocks=1.7.1=py310hff52083_5
- pytest=7.1.2=py310hff52083_0
- python=3.10.5=h582c2e5_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-fastjsonschema=2.16.1=pyhd8ed1ab_0
- python-irodsclient=1.1.4=pyhd8ed1ab_0
- python-slugify=6.1.2=pyhd8ed1ab_0
- python_abi=3.10=2_cp310
- pytz=2022.1=pyhd8ed1ab_0
- pyu2f=0.1.5=pyhd8ed1ab_0
- pyyaml=6.0=py310h5764c6d_4
- ratelimiter=1.2.0=py_1002
- re2=2022.06.01=h27087fc_0
- readline=8.1.2=h0f457ee_0
- requests=2.28.1=pyhd8ed1ab_0
- retry=0.9.2=py_0
- rich=12.5.1=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- s3transfer=0.6.0=pyhd8ed1ab_0
- setuptools=63.3.0=py310hff52083_0
- setuptools-scm=7.0.5=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- slacker=0.14.0=py_0
- smart_open=6.0.0=pyhd8ed1ab_0
- smmap=3.0.5=pyh44b312d_0
- snakemake=7.12.0=hdfd78af_0
- snakemake-minimal=7.12.0=pyhdfd78af_0
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- sqlite=3.39.2=h4ff8645_0
- stone=3.3.1=pyhd8ed1ab_0
- stopit=1.1.2=py_0
- tabulate=0.8.10=pyhd8ed1ab_0
- tblib=1.7.0=pyhd8ed1ab_0
- text-unidecode=1.3=py_0
- tk=8.6.12=h27826a3_0
- tomli=2.0.1=pyhd8ed1ab_0
- toolz=0.12.0=pyhd8ed1ab_0
- toposort=1.7=pyhd8ed1ab_0
- tornado=6.1=py310h5764c6d_3
- traitlets=5.3.0=pyhd8ed1ab_0
- typing-extensions=4.3.0=hd8ed1ab_0
- typing_extensions=4.3.0=pyha770c72_0
- tzdata=2022a=h191b570_0
- ubiquerg=0.6.2=pyhd8ed1ab_0
- unidecode=1.3.4=pyhd8ed1ab_0
- uritemplate=4.1.1=pyhd8ed1ab_0
- urllib3=1.26.11=pyhd8ed1ab_0
- veracitools=0.1.3=py_0
- wcwidth=0.2.5=pyh9f0ad1d_2
- wheel=0.37.1=pyhd8ed1ab_0
- wrapt=1.14.1=py310h5764c6d_0
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h7f98852_2
- yarl=1.7.2=py310h5764c6d_2
- yte=1.5.1=py310hff52083_0
- zict=2.2.0=pyhd8ed1ab_0
- zipp=3.8.1=pyhd8ed1ab_0
- zlib=1.2.12=h166bdaf_2