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Construction of a single gene-metacell matrix from multiple raw UMI data

Usage

python raw_umi_merger.py <cluster_assignment_file> <raw_umi_folder> <pickle_output_file>

Inputs

cluster_assignment_file, raw_umi_folder can be downloaded from this website or email the authors from the original papers [1] [2]

Reference papers

1. Sebé-Pedrós et al., 2018a
2. Sebé-Pedrós et al., 2018b

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