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Merge pull request #14 from mtbc/Insight-v5.5.14
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Insight v5.5.14 is now released.
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jburel committed Oct 9, 2020
2 parents fe698da + 344a619 commit 6ac056c
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4 changes: 2 additions & 2 deletions binder/postBuild
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# Desktop applications
# Fiji and OMERO insight

OMERO_INSIGHT_VERSION=5.5.11
OMERO_INSIGHT_VERSION=5.5.14
OMERO_INSIGHT_URL_BASE=https://github.com/ome/omero-insight/releases/download/v$OMERO_INSIGHT_VERSION

wget https://downloads.imagej.net/fiji/latest/fiji-nojre.zip
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pip install .
python -c "from pkg_resources import iter_entry_points; print(list(iter_entry_points(group='jupyter_serverproxy_servers')))"

popd
popd
2 changes: 1 addition & 1 deletion docs/headless_notebook.rst
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Expand Up @@ -21,7 +21,7 @@ Fiji has been installed in a Docker image using repo2docker.
Resources
---------

- Data: Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/webclient/?show=project-51>`_.
- Data: Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/search/?query=Name:idr0051>`_.
- Macro: :download:`fiji-macro-segment.ijm <../scripts/fiji-macro-segment.ijm>`

Step-by-Step
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2 changes: 1 addition & 1 deletion docs/manual_analysis.rst
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Resources
---------

- Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/webclient/?show=project-51>`__.
- Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/search/?query=Name:idr0051>`__.


Step-by-step
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2 changes: 1 addition & 1 deletion docs/threshold_manual.rst
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Expand Up @@ -29,7 +29,7 @@ Setup
Resources
---------

- Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/webclient/?show=project-51>`__.
- Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/search/?query=Name:idr0051>`__.

Step-by-step
------------
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2 changes: 1 addition & 1 deletion docs/threshold_scripting.rst
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Expand Up @@ -36,7 +36,7 @@ Setup
Resources
---------

- Data: Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/webclient/?show=project-51>`_.
- Data: Samples images from the Image Data Resource (IDR) `idr0021 <https://idr.openmicroscopy.org/search/?query=Name:idr0051>`_.

- `Java API documentation <https://docs.openmicroscopy.org/latest/omero/developers/Java.html>`__.

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2 changes: 1 addition & 1 deletion notebooks/idr0021.ipynb
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Expand Up @@ -168,7 +168,7 @@
"source": [
"## Select an image . Do not re-run this cell.\n",
"\n",
"Select an image from the [idr0021 study](https://idr.openmicroscopy.org/webclient/?show=project-51)."
"Select an image from the [idr0021 study](https://idr.openmicroscopy.org/search/?query=Name:idr0051)."
]
},
{
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