changed the if order-colorpalettes #573
Workflow file for this run
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# The purpose of this action is to run `document()` of the roxygen2 package on each commit. | |
# If new documentation was generated, it will automatically add a commit to the current branch. | |
# This has the same effect as running `document()` locally, but | |
# * ensures it cannot be forgotten | |
# * saves setting up the development environment locally, which is especially useful for new contributors. | |
# | |
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
pull_request: | |
paths: ["R/**", ".github/workflows"] | |
name: Document | |
jobs: | |
document: | |
runs-on: self-hosted #ubuntu-latest | |
env: | |
GITHUB_PAT: ${{ secrets.TOKEN }} | |
steps: | |
- name: Checkout repo | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
# extra token required to trigger github actions again on commit | |
token: ${{ secrets.TOKEN }} # BOT_GH_TOKEN | |
- name: Setup R | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- name: Install pak | |
run: Rscript -e "install.packages('pak', repos='https://cran.rstudio.com/')" | |
#- name: Install SpatialExperiment | |
# run: Rscript -e "pak::pkg_install('drighelli/SpatialExperiment')" | |
- name: Install Devtools | |
run: Rscript -e "pak::pkg_install('devtools')" | |
- name: Install SpatialExperiment | |
run: Rscript -e "devtools::install_github('drighelli/SpatialExperiment')" | |
- name: Install dependencies | |
uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
dependencies: '"hard"' # do not install suggests | |
extra-packages: any::roxygen2 | |
needs: roxygen2 | |
- name: Document | |
run: roxygen2::roxygenise() | |
shell: Rscript {0} | |
- uses: stefanzweifel/git-auto-commit-action@v4 | |
with: | |
commit_message: Roxygenize |