UConn Computational Biology Core

All

17 repositories

Genome_Assembly
Public
Shell
•
GNU General Public License v3.0
•10•23•7•0•Updated Jun 5, 2024Jun 5, 2024
Job-Arrays-on-Xanadu
Public
A guide to splitting up big jobs using slurm job arrays on the xanadu cluster
Shell
•2•1•0•0•Updated May 9, 2024May 9, 2024
RADseq_tutorial_grayling
Public
Shell
•
GNU General Public License v3.0
•7•5•2•0•Updated Mar 20, 2024Mar 20, 2024
NextFlow_Training
Public
Nextflow
•0•0•0•0•Updated Mar 6, 2024Mar 6, 2024
Polygenic-Risk-Score-Analysis
Public
0•1•0•0•Updated Nov 27, 2023Nov 27, 2023
RNAseq_nonmodel
Public
R
•
GNU General Public License v3.0
•22•8•6•0•Updated Nov 15, 2023Nov 15, 2023
Variant-Calling
Public
Shell
•10•10•0•0•Updated Oct 19, 2023Oct 19, 2023
Intro-to-Xanadu
Public
JavaScript
•0•0•0•0•Updated Sep 1, 2023Sep 1, 2023
CBC_Docs
Public
The CBC wiki
0•1•0•0•Updated Aug 11, 2023Aug 11, 2023
Structural-Annotation
Public
Shell
•
GNU General Public License v3.0
•7•12•6•0•Updated Jun 12, 2023Jun 12, 2023
Slurm_Feature_Constraints
Public
How to request Node features by using Slurm constraints
0•1•0•0•Updated Mar 21, 2023Mar 21, 2023
Connect_SublimeText_to_RemoteServer_Over_SSH
Public
0•0•0•0•Updated Feb 23, 2023Feb 23, 2023
RNA-seq-with-reference-genome-and-annotation
Public
Shell
•
GNU General Public License v3.0
•17•18•5•0•Updated Dec 8, 2022Dec 8, 2022
FAQ
Public
GNU General Public License v3.0
•0•1•0•0•Updated Mar 3, 2022Mar 3, 2022
TemplateScripts4Xanadu
Public
Scripts added here are to illustrate the usage syntax of different packages and commands. The scripts deposited here are sole purpose of serving as templates. Users have to modify them to use in their own analysis.
Shell
•3•0•0•0•Updated Jan 10, 2022Jan 10, 2022
genome_size_estimation
Public
R
•5•2•0•0•Updated Jan 21, 2021Jan 21, 2021
software-example-guide
Public
GNU General Public License v3.0
•2•1•0•0•Updated Jun 11, 2019Jun 11, 2019