{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"SCPSampleAnnotationWizard","owner":"CBFLivUni","isFork":false,"description":"Generates sample annotation .csv files to be passed to the colData argument in the readSCP() function from the scp R package.","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-27T10:25:14.984Z"}},{"type":"Public","name":"neonatalIntestinal_fecalBacteriaInflammation","owner":"CBFLivUni","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-02T10:38:32.773Z"}},{"type":"Public","name":"Epigenetics-OA-Risk-Human-Skeletal-Dev","owner":"CBFLivUni","isFork":false,"description":"Methylation and mqtl analysis of the developing knee","allTopics":["methylation","colocalization","mqtl","genotyping","osteoarthritis"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-29T11:48:15.812Z"}},{"type":"Public","name":"InflammatorySkinGeoMX","owner":"CBFLivUni","isFork":false,"description":"Spatial transcriptomics analysis of inflammatory skin diseases ","allTopics":["skin","psoriasis","spatial-transcriptomics","geomx"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-17T13:54:03.894Z"}},{"type":"Public","name":"EffectorScan-prototype","owner":"CBFLivUni","isFork":false,"description":"Identification of novel effectors among unique fungal genes (fusarium oxysporum). ","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-05T16:31:20.970Z"}},{"type":"Public","name":"SERPINA3Chondrogenesis","owner":"CBFLivUni","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-13T14:08:02.677Z"}},{"type":"Public","name":"SkeletalVis-Transcriptomics","owner":"CBFLivUni","isFork":false,"description":"Nextflow pipeline for microarray and RNA-seq","allTopics":["rna-seq","nextflow","microarray","transcriptomics","pathway-analysis"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":2,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-03T17:28:19.995Z"}},{"type":"Public","name":"PubLLican","owner":"CBFLivUni","isFork":false,"description":"Publication GO term annotation using ChatGPT","allTopics":["text-mining","gene-ontology","chatgpt-api"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-18T12:18:52.006Z"}},{"type":"Public","name":"IntroductionToTidyModels","owner":"CBFLivUni","isFork":false,"description":"Introduction to machine learning with tidymodels","allTopics":["machine-learning","tidymodels","epigenetic-clock"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-19T11:35:26.672Z"}},{"type":"Public","name":"northernbug.github.io","owner":"CBFLivUni","isFork":true,"description":"The NorthernBUG Website","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3549,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-19T09:29:28.680Z"}},{"type":"Public","name":"Raymant-et-al-2023","owner":"CBFLivUni","isFork":false,"description":"","allTopics":["single-cell-rna-seq"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-20T19:53:39.067Z"}},{"type":"Public","name":"Astuti_et_al_2023","owner":"CBFLivUni","isFork":false,"description":"R code to accompany the publication","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-08T19:55:43.652Z"}},{"type":"Public","name":"Turlo_MSC_secretome_proteomics","owner":"CBFLivUni","isFork":false,"description":"","allTopics":["time-series","imputation","proteomics","nmf"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-03T11:50:05.582Z"}},{"type":"Public","name":"googlemaps_simple_demo","owner":"CBFLivUni","isFork":false,"description":"Very simple google maps demo","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-08-18T20:46:18.372Z"}},{"type":"Public","name":"mapping_and_enrichment","owner":"CBFLivUni","isFork":false,"description":"Collection of code that maps IDs and does enrichment.","allTopics":["functional-enrichment-analysis","non-model-species"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-21T09:31:28.043Z"}},{"type":"Public","name":"sars2nterm","owner":"CBFLivUni","isFork":true,"description":"Code Repository for SARS-CoV-2 N-terminomics data from Meyer et al. 2020","allTopics":[],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-11T15:40:53.690Z"}},{"type":"Public","name":"example_Rocker_repo","owner":"CBFLivUni","isFork":false,"description":"how to set up a repo with authentication using keys","allTopics":["tutorial","rstudio","rocker"],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-18T11:37:31.221Z"}}],"repositoryCount":17,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"CBFLivUni repositories"}