Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Error while installing simbody #10

Closed
ahundt opened this issue Mar 18, 2014 · 5 comments
Closed

Error while installing simbody #10

ahundt opened this issue Mar 18, 2014 · 5 comments

Comments

@ahundt
Copy link

ahundt commented Mar 18, 2014

I ran the following command and got the resulting output errors:

○ brew install simbody
==> Downloading https://github.com/simbody/simbody/archive/Simbody-3.3.zip
######################################################################## 100.0%
==> Patching
patching file CMakeLists.txt
==> cmake -DSimTK_INSTALL_PREFIX='/usr/local/Cellar/simbody/3.3' -DCMAKE_INSTALL_PREFIX=/usr/local/Cellar/simbody/
==> make install
/usr/local/Library/ENV/4.3/clang++   -dynamiclib -Wl,-headerpad_max_install_names   -compatibility_version 3.3.0 -o ../../libSimTKmath.3.3.dylib -install_name /tmp/simbody-fYuT/simbody-Simbody-3.3/build/libSimTKmath.3.3.dylib CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/Eigen.cpp.o CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/Factor.cpp.o CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/FactorQTZ.cpp.o CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/FactorSVD.cpp.o CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/LapackConvert.cpp.o CMakeFiles/SimTKmath.dir/__/LinearAlgebra/src/LapackInterface.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_band.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_bandpre.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_bbdpre.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_dense.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_direct.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_ic.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_io.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_lapack.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_nls.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_proj.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_root.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_spbcgs.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_spgmr.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_spils.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/cpodes/cpodes_sptfqmr.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/nvec_ser/fnvector_serial.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/nvec_ser/nvector_serial.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_band.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_dense.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_direct.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_iterative.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_lapack.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_math.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_nvector.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_spbcgs.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_spgmr.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/sundials/src/sundials/sundials_sptfqmr.c.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/nvector_SimTK.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodes/SimTKcpodes.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/AbstractIntegratorRep.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/CPodesIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/ExplicitEulerIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/Integrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/RungeKutta2Integrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/RungeKutta3Integrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/RungeKuttaFeldbergIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/RungeKuttaMersonIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/SemiExplicitEuler2Integrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/SemiExplicitEulerIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/TimeStepper.cpp.o CMakeFiles/SimTKmath.dir/__/Integrators/src/VerletIntegrator.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpAdaptiveMuUpdate.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpAlgBuilder.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpAlgorithmRegOp.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpAugRestoSystemSolver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpBacktrackingLineSearch.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpBlas.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpCompoundMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpCompoundSymMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpCompoundVector.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDebug.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDefaultIterateInitializer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDenseGenMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDenseSymMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDenseVector.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpDiagMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpExactHessianUpdater.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpExpansionMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpFilter.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpFilterLSAcceptor.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpGenTMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpGradientScaling.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIdentityMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpInterfacesRegOp.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIpoptAlg.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIpoptApplication.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIpoptCalculatedQuantities.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIpoptData.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpIteratesVector.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpJournalist.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLapack.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLapackSolverInterface.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLeastSquareMults.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLimMemQuasiNewtonUpdater.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLinearSolversRegOp.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLoqoMuOracle.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLowRankAugSystemSolver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpLowRankUpdateSymMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpMonotoneMuUpdate.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpMultiVectorMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpNLPScaling.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpObserver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpOptErrorConvCheck.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpOptionsList.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpOrigIpoptNLP.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpOrigIterationOutput.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpPDFullSpaceSolver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpPDPerturbationHandler.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpProbingMuOracle.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpQualityFunctionMuOracle.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRegOptions.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoFilterConvCheck.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoIpoptNLP.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoIterateInitializer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoIterationOutput.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoMinC_1Nrm.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpRestoRestoPhase.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpScaledMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSolveStatistics.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpStdAugSystemSolver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpStdCInterface.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpStdInterfaceTNLP.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSumMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSumSymMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSymMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSymScaledMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpSymTMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTaggedObject.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTimingStatistics.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTNLPAdapter.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTripletHelper.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTripletToCSRConverter.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTripletToDenseConverter.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpTSymLinearSolver.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpUserScaling.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpUtils.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpVector.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpWarmStartIterateInitializer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/IpOpt/IpZeroMatrix.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/CFSQPOptimizer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/InteriorPointOptimizer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/lbfgs.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/lbfgsb.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/LBFGSBOptimizer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/LBFGSOptimizer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/Optimizer.cpp.o CMakeFiles/SimTKmath.dir/__/Optimizers/src/OptimizerRep.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/BicubicSurface.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/CollisionDetectionAlgorithm.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Contact.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_Cylinder.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_Ellipsoid.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_HalfSpace.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_SmoothHeightMap.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_Sphere.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_Torus.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactGeometry_TriangleMesh.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/ContactTracker.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/gcvspl.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/GCVSPLUtil.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geo.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geo_Box.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geo_Point.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geo_Sphere.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geo_Triangle.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/Geodesic.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/OBBTree.cpp.o CMakeFiles/SimTKmath.dir/__/Geometry/src/OrientedBoundingBox.cpp.o CMakeFiles/SimTKmath.dir/__/src/About.cpp.o CMakeFiles/SimTKmath.dir/__/src/Differentiator.cpp.o CMakeFiles/SimTKmath.dir/__/src/MultibodyGraphMaker.cpp.o  -L/tmp/simbody-fYuT/simbody-Simbody-3.3/build ../../libSimTKcommon.3.3.dylib -llapack -lblas -lpthread -ldl -lm -Wl,-rpath,/tmp/simbody-fYuT/simbody-Simbody-3.3/build
cd /tmp/simbody-fYuT/simbody-Simbody-3.3/build/SimTKmath/sharedTarget && /usr/local/Cellar/cmake/2.8.12.2/bin/cmake -E cmake_symlink_library ../../libSimTKmath.3.3.dylib ../../libSimTKmath.3.3.dylib ../../libSimTKmath.dylib
/usr/local/Cellar/cmake/2.8.12.2/bin/cmake -E cmake_progress_report /tmp/simbody-fYuT/simbody-Simbody-3.3/build/CMakeFiles  30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
[ 55%] Built target SimTKmath
make: *** [all] Error 2

READ THIS: https://github.com/Homebrew/homebrew/wiki/troubleshooting
If reporting this issue please do so at (not Homebrew/homebrew):
  https://github.com/osrf/homebrew-simulation/issues
@scpeters
Copy link
Member

Can you do brew install simbody --verbose and put the output in a gist? I can't see what the exact error is, just that it's a problem linking the math library.

@ahundt
Copy link
Author

ahundt commented Mar 18, 2014

@scpeters
Copy link
Member

I assume you are using Mavericks (OSX 10.9)? This was a bug that has been fixed but not yet released. Try brew install simbody --HEAD as we wait on the release of simbody 3.4.

@sherm1
Copy link

sherm1 commented Mar 27, 2014

Simbody 3.4 is released now.

@scpeters
Copy link
Member

Thanks @sherm1 I just updated the homebrew formula accordingly.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

3 participants