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Added missing elements and moved two attributes #1

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Added missing elements and moved two attributes #1

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67 changes: 47 additions & 20 deletions test/resources/biosynth1_network.gpml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,107 +2,134 @@
<ns0:Graphics BoardWidth="1144" BoardHeight="1247"/>
<ns0:DataNode TextLabel="Phytostero" GraphId="t0" Type="Metabolite">
<ns0:Graphics CenterX="195" CenterY="357" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Triterpeno" GraphId="t1" Type="Metabolite">
<ns0:Graphics CenterX="197" CenterY="529" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Monoterpen" GraphId="t8" Type="Metabolite">
<ns0:Graphics CenterX="813" CenterY="423" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Geranyl di" GraphId="t7" Type="Metabolite">
<ns0:Graphics CenterX="450" CenterY="424" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Farnasyl d" GraphId="t3" Type="Metabolite">
<ns0:Graphics CenterX="455" CenterY="631" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="FPP syntha" GraphId="t9" Type="Metabolite">
<ns0:Graphics CenterX="571" CenterY="528" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Squalene" GraphId="t2" Type="Metabolite">
<ns0:Graphics CenterX="198" CenterY="633" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Sesquiterp" GraphId="t4" Type="Metabolite">
<ns0:Graphics CenterX="810" CenterY="629" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="2X" GraphId="t6" Type="Metabolite">
<ns0:Graphics CenterX="379" CenterY="598" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Saponins" GraphId="t5" Type="Metabolite">
<ns0:Graphics CenterX="201" CenterY="806" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Geranylger" GraphId="t11" Type="Metabolite">
<ns0:Graphics CenterX="422" CenterY="909" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="GGPP synth" GraphId="t10" Type="Metabolite">
<ns0:Graphics CenterX="577" CenterY="736" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Diterpenes" GraphId="t12" Type="Metabolite">
<ns0:Graphics CenterX="887" CenterY="907" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="Polyterpen" GraphId="t14" Type="Metabolite">
<ns0:Graphics CenterX="508" CenterY="1116" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:DataNode TextLabel="(+PP)" GraphId="t13" Type="Metabolite">
<ns0:Graphics CenterX="582" CenterY="1012" Width="80" Height="30" ZOrder="32768" FontSize="12" Valign="Middle" Color="0000ff"/>
<ns0:Xref Database="" ID=""/>
</ns0:DataNode>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
<ns0:Graphics>
<ns0:Interaction>
<ns0:Graphics ZOrder="32768" LineThickness="1.0">
<ns0:Point X="220" Y="260" GraphRef="t0" RelX="1.0" RelY="0.0"/>
<ns0:Point X="500" Y="540" GraphRef="t1" RelX="1.0" RelY="0.0" ArrowHead="mim-conversion"/>
</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
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<ns0:Graphics ZOrder="32768" LineThickness="1.0">
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<ns0:Point X="417" Y="457" GraphRef="t7" RelX="1.0" RelY="0.0" ArrowHead="mim-conversion"/>
</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
<ns0:Graphics>
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<ns0:Graphics ZOrder="32768" LineThickness="1.0">
<ns0:Point X="577" Y="617" GraphRef="t3" RelX="1.0" RelY="0.0"/>
<ns0:Point X="503" Y="617" GraphRef="t7" RelX="1.0" RelY="0.0" ArrowHead="mim-conversion"/>
</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
<ns0:Graphics>
<ns0:Interaction>
<ns0:Graphics ZOrder="32768" LineThickness="1.0">
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<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
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</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
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</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:Interaction ZOrder="32768" LineThickness="1.0">
<ns0:Graphics>
<ns0:Interaction>
<ns0:Graphics ZOrder="32768" LineThickness="1.0">
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<ns0:Xref Database="" ID=""/>
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<ns0:Graphics ZOrder="32768" LineThickness="1.0">
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<ns0:Xref Database="" ID=""/>
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<ns0:Xref Database="" ID=""/>
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</ns0:Graphics>
<ns0:Xref Database="" ID=""/>
</ns0:Interaction>
<ns0:InfoBox CenterX="0.0" CenterY="0.0" />
<ns0:Biopax />
</ns0:Pathway>