atg43 deletion collection allele update

[ValWood]

• change allele in bioneer data to
    | atg43 | atg43-1(atg43::kanMX4(nt49-203))

changed pombe-embl/external_data/phaf_files/chado_load/htp_phafs
PMID_23697806_phaf.tsv
cc @kimrutherford incase of chado load problem

SPAC14C4.01c FYPO:0002177 49-203 Null 975 h+ h+ ura4-D18 leu1-32 ade6-M210 atg43-1 nucleotide deletion Microscopy FYECO:0000005,FYECO:0000137 FYPO_EXT:0000001 PMID:23697806 4896 20120101
SPAC14C4.01c FYPO:0002060 49-203 Null 975 h+ h+ ura4-D18 leu1-32 ade6-M210 atg43-1 nucleotídeos deletion Microscopy FYECO:0000005,FYECO:0000137 PMID:23697806 4896 20120101

[ValWood]

Hayles et al

Also need to update these phenotypes if they used the Bioneer library
Malecki M et al. (2016)
Sideri T et al. (2014)
(But check library version as the deletions might have been updated after publication, I can't remember)

Gregan one is OK as it predates the library (2005)

[ValWood]

Hi @bahler did you use the bioneer library for atg43
https://www.pombase.org/reference/PMID:27887640?

[bahler]

Yes, with auxotrophic markers crossed out Best, -Jürg

[ValWood]

updated
PMID_27887640_phaf.tsv
SPAC14C4.01c FYPO:0000251 49-203 null 972 h- H1::hygr nucleotide deletion Cell growth assay FYECO:0000148,FYECO:0000005 FYPO_EXT:0000003 PMID:27887640 4896 2017-03-08

Also add to allele comments

"bioneer collection atg43 deletion is atg43-1(atg43::kanMX4(nt49-203)" (pers. comm Li-lin DU but I think we can only add refernces to allele comments?)