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degron #3319

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ValWood opened this issue Aug 3, 2022 · 4 comments
Closed
2 tasks

degron #3319

ValWood opened this issue Aug 3, 2022 · 4 comments
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@ValWood
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ValWood commented Aug 3, 2022

  • standardize
  • classify as WT knockdown? (with the degron mentioned in the gene name, if this method works for wt/promoter combo)

cut14-aid,SPBP4H10.06c:allele-25,auxin-inducible degron,{f54275f3a8758cf5}
tdSMN,SPAC2G11.08c:allele-2,temperature-degron allele,{f0e36621b9f61ff1,4471143954453503,4da586afa92f17fa,259aebc0ce336450,635d1ba383ac123c,1bfbcff2428f3678}
spt5-degron,SPAC23C4.19:allele-20,degron,{3cf736f8c8908f87}
rna14,SPAC6F12.17:allele-7,Auxin-inducible degron,{f54275f3a8758cf5}
dhp1,SPAC26A3.12c:allele-15,Auxin-inducible degron,{f54275f3a8758cf5}

@ValWood
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ValWood commented Aug 4, 2022

name gene-degron
description fusion;gene-degron

phenotype
protein degraded in the presence of auxin

@ValWood ValWood mentioned this issue Aug 4, 2022
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@ValWood ValWood self-assigned this Aug 4, 2022
@ValWood
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ValWood commented Aug 4, 2022

before proceeding, gene name in or out of description if only one gene involved?
#3314 (comment)

@ValWood
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ValWood commented Apr 3, 2023

Also this one? (I removed myself anyways)

@manulera
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manulera commented Apr 3, 2023

Hi, this can be annotated as a tag following the rules, I have added a note to comment on the paper, but I am fixing these alogn with the other fusions.

@manulera manulera closed this as completed Apr 3, 2023
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