fixed some spelling errors in the new tests

primer3-org · Sep 30, 2009 · 2f3f1b3 · 2f3f1b3
1 parent 8eb9b43
commit 2f3f1b3
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Showing 5 changed files with 13 additions and 13 deletions.
diff --git a/test/primer_ok_regions_formatted_output b/test/primer_ok_regions_formatted_output
@@ -103,7 +103,7 @@ considered 1, ok 1
 primer3 release 2.0.0
 
 
-PRIMER PICKING RESULTS FOR SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 contrained left and right primers - OK
+PRIMER PICKING RESULTS FOR SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 constrained left and right primers - OK
 
 No mispriming library specified
 Using 1-based sequence positions

diff --git a/test/primer_ok_regions_input b/test/primer_ok_regions_input
@@ -31,7 +31,7 @@ SEQUENCE_PRIMER_PAIR_OK_REGION_LIST=,,,
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
 SEQUENCE_PRIMER_REVCOMP=aaaaaaacacaatccA
 =
-SEQUENCE_ID=SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 contrained left and right primers - OK
+SEQUENCE_ID=SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 constrained left and right primers - OK
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_PRIMER_PAIR_OK_REGION_LIST=1,20,49,17
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa

diff --git a/test/primer_ok_regions_output b/test/primer_ok_regions_output
@@ -112,7 +112,7 @@ PRIMER_PAIR_0_COMPL_ANY=4.00
 PRIMER_PAIR_0_COMPL_END=0.00
 PRIMER_PAIR_0_PRODUCT_SIZE=65
 =
-SEQUENCE_ID=SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 contrained left and right primers - OK
+SEQUENCE_ID=SEQUENCE_PRIMER_PAIR_OK_REGION_LIST test 4 constrained left and right primers - OK
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_PRIMER_PAIR_OK_REGION_LIST=1,20,49,17
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa

diff --git a/test/primer_overlap_junction_input b/test/primer_overlap_junction_input
@@ -1,4 +1,4 @@
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 01 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 01 -- OVERLAP
 P3_COMMENT=The 50th nt is uppercase
 PRIMER_NUM_RETURN=1
 PRIMER_EXPLAIN_FLAG=1
@@ -22,25 +22,25 @@ PRIMER_MIN_SIZE=16
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
 SEQUENCE_PRIMER_REVCOMP=aaaaaaacacaatccAga
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 02 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 02 -- OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
 SEQUENCE_PRIMER_REVCOMP=aaaaaaacacaatccAg
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 03 -- NO OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 03 -- NO OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
 SEQUENCE_PRIMER_REVCOMP=aaaaaaacacaatccA
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIMER_OVERLAP_OF_JUNCTION TEST 08 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIME_OVERLAP_OF_JUNCTION TEST 08 -- OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=ttgttcattctgtttcTgg
 SEQUENCE_PRIMER_REVCOMP=catcacacccttttacacatt
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIMER_OVERLAP_OF_JUNCTION TEST 09 -- NO OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIME_OVERLAP_OF_JUNCTION TEST 09 -- NO OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=ttgttcattctgtttcTg

diff --git a/test/primer_overlap_junction_output b/test/primer_overlap_junction_output
@@ -1,4 +1,4 @@
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 01 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 01 -- OVERLAP
 P3_COMMENT=The 50th nt is uppercase
 PRIMER_NUM_RETURN=1
 PRIMER_EXPLAIN_FLAG=1
@@ -49,7 +49,7 @@ PRIMER_PAIR_0_COMPL_ANY=5.00
 PRIMER_PAIR_0_COMPL_END=2.00
 PRIMER_PAIR_0_PRODUCT_SIZE=65
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 02 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 02 -- OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
@@ -82,7 +82,7 @@ PRIMER_PAIR_0_COMPL_ANY=5.00
 PRIMER_PAIR_0_COMPL_END=1.00
 PRIMER_PAIR_0_PRODUCT_SIZE=65
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIMER_OVERLAP_OF_JUNCTION TEST 03 -- NO OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_3_PRIME_OVERLAP_OF_JUNCTION TEST 03 -- NO OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=cttgattcaatgaatctcaa
@@ -95,7 +95,7 @@ PRIMER_RIGHT_NUM_RETURNED=0
 PRIMER_INTERNAL_NUM_RETURNED=0
 PRIMER_PAIR_NUM_RETURNED=0
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIMER_OVERLAP_OF_JUNCTION TEST 08 -- OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIME_OVERLAP_OF_JUNCTION TEST 08 -- OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=ttgttcattctgtttcTgg
@@ -128,7 +128,7 @@ PRIMER_PAIR_0_COMPL_ANY=3.00
 PRIMER_PAIR_0_COMPL_END=1.00
 PRIMER_PAIR_0_PRODUCT_SIZE=67
 =
-SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIMER_OVERLAP_OF_JUNCTION TEST 09 -- NO OVERLAP
+SEQUENCE_ID=Details of SEQUENCE_OVERLAP_JUNCTION_LIST and PRIMER_MIN_5_PRIME_OVERLAP_OF_JUNCTION TEST 09 -- NO OVERLAP
 SEQUENCE_TEMPLATE=cttgattcaatgaatctcaaaaatggattactattgttcattctgtttcTggattgtgtttttttcaaagttgaatccaaatgtgtaaaagggtgtgatg
 SEQUENCE_OVERLAP_JUNCTION_LIST=50
 SEQUENCE_PRIMER=ttgttcattctgtttcTg