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showOverlapTable problem #1602

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Yago52 opened this issue Nov 2, 2022 · 2 comments · Fixed by #1646
Closed

showOverlapTable problem #1602

Yago52 opened this issue Nov 2, 2022 · 2 comments · Fixed by #1646

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@Yago52
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Yago52 commented Nov 2, 2022

I'm trying to run this code and getting this error, but before I update anaconda this code works. Any suggestions?

fig = plt.figure(num=None, figsize=(6,2.5), dpi=200, facecolor='w', edgecolor='k')
g_pca = GridSpec(ncols=1, nrows=1,height_ratios=[4.4],hspace=0.3)
#plt.style.use('default')
plt.tick_params(direction='out', length=3, width=1, colors='k',
               grid_color='k', grid_alpha=0.5)
rcParams['font.family'] = 'arial'
rcParams['axes.linewidth'] = 2.0
rcParams['lines.markersize'] = 6
rcParams['xtick.labelsize']  = 8
rcParams['ytick.labelsize']  = 8
rcParams['font.weight']= 'heavy'
font = {'family': 'arial',
        'color':  'black',
        'weight': 'heavy',
        'size': 9,
        }

subplot(g_pca[0]);
showOverlapTable(pca_all_close[:5], anm_all_close[:5])#,cmap= 'Blues');
ylabel('ANM modes',fontdict=font)
xlabel('PCs',fontdict=font)
title('ANM modes vs PCs',fontdict=font);

imagem_2022-11-02_124504642

@jamesmkrieger
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I'm not even sure if this is a prody problem or a matplotlib problem. Can you try running it line by line and checking which line causes the problem?

@jamesmkrieger
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I think this is the same problem as we had in #1644 - the newest matplotlib doesn't like the interactive option of showMatrix

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2 participants