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V4 baseline #160

Merged
merged 38 commits into from Oct 19, 2021
Merged

V4 baseline #160

merged 38 commits into from Oct 19, 2021

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dczulada
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@dczulada dczulada commented Oct 5, 2021

Pull requests into cqm-parsers require the following. Submitter and reviewer should ✅ when done. For items that are not-applicable, note it's not-applicable ("N/A") and ✅.

Submitter:

  • This pull request describes why these changes were made.
  • Internal ticket for this PR:
  • Internal ticket links to this PR
  • Code diff has been done and been reviewed
  • Tests are included and test edge cases
  • Tests have been run locally and pass

Reviewer 1:

Name:

  • Code is maintainable and reusable, reuses existing code and infrastructure where appropriate, and accomplishes the task’s purpose
  • The tests appropriately test the new code, including edge cases
  • You have tried to break the code

Reviewer 2:

Name:

  • Code is maintainable and reusable, reuses existing code and infrastructure where appropriate, and accomplishes the task’s purpose
  • The tests appropriately test the new code, including edge cases
  • You have tried to break the code

hossenlopp and others added 30 commits April 25, 2019 09:59
…rk from master. (#39)

* Fixed SDC loading to work with newer DRC measures.
 - Fixed issues with most data criteria getting thrown out.

* Bring over dependabot nokogiri update and the simplexml_parser removal from #30.
[Security] Update nokogiri requirement from ~> 1.8.5 to >= 1.8.5, < 1.11.0
Updates the requirements on [nokogiri](https://github.com/sparklemotion/nokogiri) to permit the latest version.
- [Release notes](https://github.com/sparklemotion/nokogiri/releases)
- [Changelog](https://github.com/sparklemotion/nokogiri/blob/master/CHANGELOG.md)
- [Commits](sparklemotion/nokogiri@v1.8.5...v1.10.3)

* Add the hqmf identifier to a statement reference (#25)
* 2019 standards update entry point fix (#54)
* fixed gem entry point file to be named properly
* fix issue with loading api uploaded files (#55)
* [Security] Bump nokogiri from 1.10.3 to 1.10.4
* Bump cqm-models version to 3.0.0
…1.0 (#67)

* [Security] Update rubyzip requirement from ~> 1.2.2 to >= 1.2.2, < 2.1.0

Updates the requirements on [rubyzip](https://github.com/rubyzip/rubyzip) to permit the latest version.
- [Release notes](https://github.com/rubyzip/rubyzip/releases)
- [Changelog](https://github.com/rubyzip/rubyzip/blob/master/Changelog.md)
- [Commits](rubyzip/rubyzip@v1.2.3...v2.0.0)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>

* Updated rubyzip dependency to be less than version 2.x, which requires ruby 2.4
* Updated version of bonnie_version cqm-parser branch

* Updated cqm-parser (binnie_viersion branch)
Bumps [nokogiri](https://github.com/sparklemotion/nokogiri) from 1.10.5 to 1.10.8. **This update includes a security fix.**
- [Release notes](https://github.com/sparklemotion/nokogiri/releases)
- [Changelog](https://github.com/sparklemotion/nokogiri/blob/master/CHANGELOG.md)
- [Commits](sparklemotion/nokogiri@v1.10.5...v1.10.8)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>
Bumps [rake](https://github.com/ruby/rake) from 12.3.1 to 12.3.3. **This update includes a security fix.**
- [Release notes](https://github.com/ruby/rake/releases)
- [Changelog](https://github.com/ruby/rake/blob/master/History.rdoc)
- [Commits](ruby/rake@v12.3.1...v12.3.3)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>

Co-authored-by: dependabot-preview[bot] <27856297+dependabot-preview[bot]@users.noreply.github.com>
* made necessary upgrades to line up with bonnie's rails upgrade -> 5.2

* removed deprecated require

* updated codecov (0.1.14 -> 0.2.5) and json (2.1.0 -> 2.3.1) to fix 'Title: json Gem for Ruby Unsafe Object Creation Vulnerability (additional fix)'
* cqm-models 3.0.0 -> 3.0.3

* ran bundle install
* BONNIEMAT-623 & BONNIEMAT-629 cql-integration change

* cqm-models version upgrade
#114)

* Replacing vsac username/password with api key.
…ore checking sub-hash.

When QDM datatype template has includeSubTemplate, the single_code_concepts hash will not have a related key to access the sub-hash.
* MAT-2803 Update Bonnie to support UTF8 - QDM

* Ruby 2.7.2 warnings fix
* MAT-2647 Update cqm-parsers to QDM 5.6

* MAT-2647 Update cqm-parsers to QDM 5.6

* added git actions

* removed travis.yaml
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codecov-commenter commented Oct 6, 2021

Codecov Report

Merging #160 (4ce41c8) into master (fd4d124) will increase coverage by 0.10%.
The diff coverage is 100.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #160      +/-   ##
==========================================
+ Coverage   82.40%   82.50%   +0.10%     
==========================================
  Files          69       69              
  Lines        4320     4351      +31     
==========================================
+ Hits         3560     3590      +30     
- Misses        760      761       +1     
Impacted Files Coverage Δ
lib/hqmf-parser/2.0/population_criteria.rb 93.44% <100.00%> (ø)
...rser/cql/document_helpers/doc_population_helper.rb 98.90% <100.00%> (+0.03%) ⬆️
lib/measure-loader/mat_measure_files.rb 95.34% <100.00%> (ø)
lib/measure-loader/source_data_criteria_loader.rb 100.00% <100.00%> (ø)
lib/measure-loader/vsac_value_set_loader.rb 100.00% <100.00%> (ø)
lib/util/vsac_api.rb 98.07% <100.00%> (ø)
lib/hqmf-parser/2.0/document.rb 90.83% <0.00%> (-0.70%) ⬇️
lib/hqmf-parser/2.0/data_criteria.rb 81.39% <0.00%> (-0.30%) ⬇️
...rser/2.0/document_helpers/doc_population_helper.rb 77.88% <0.00%> (-0.12%) ⬇️
... and 22 more

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luis1van
luis1van previously approved these changes Oct 7, 2021
@dczulada dczulada requested a review from adongare October 7, 2021 19:39
@dczulada
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dczulada commented Oct 7, 2021

@adongare This PR should mirror the bonnie_version (with the exception of the gemspec/gemfile). There are a few extra lines that were removed to make rubocop happy as well.

@dczulada dczulada merged commit 7cb8ae9 into master Oct 19, 2021
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7 participants