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qPCR for Akabane and Tahyna (Peribunyaviridae - family, Orthobunyavirus - genus) #10

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qPCR4vir opened this issue Dec 4, 2018 · 0 comments
Open
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qPCR for Akabane and Tahyna (Peribunyaviridae - family, Orthobunyavirus - genus) #10

qPCR4vir opened this issue Dec 4, 2018 · 0 comments
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qPCR4vir commented Dec 4, 2018 •
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Bunyavirales - order (Phylum:Negarnaviricota; Subphylum:Polyploviricotina; Class:Ellioviricetes)

Peribunyaviridae - family

Orthobunyavirus - genus

*** Akabane orthobunyavirus - specie

  • seq. All GB ~429. NC_009895. Akabane virus
    segment M. 79 seq. Bis 86%, next 76%.
    Segment L only 10 near complete 12 000nt. 49 seq. Bis 89%.
    segment S. 100 seq. Bis 94%.
  • primers Literatur
  • oligos
  • primers, PCR
  • exp
    Akabane virus, (taxid:70566) (JA GAR 39).

California encephalitis orthobunyavirus - specie

California encephalitis virus + ...
Inkoo virus
La Crosse virus
*** Tahyna virus (LEIV 12812)

  • seq
  • primers Literatur
  • oligos
  • primers, PCR
  • exp

Bunyamwera orthobunyavirus - specie

Batai virus
Bunyamwera virus
Ngari virus

  • seq
  • primers Literatur
  • oligos
  • primers, PCR
  • exp

*** Nairoviridae - family. see #14

*** Phenuiviridae - family. see #13

Hantaviridae - family

Orthohantavirus - genus

specie: Puumala orthohantavirus (Sotkamo)

  • seq
  • primers Literatur
  • oligos
  • primers, PCR
  • exp
@qPCR4vir qPCR4vir self-assigned this Dec 4, 2018
@qPCR4vir qPCR4vir changed the title Bunyavirales - order qPCR for Akabane and Tahyna (Peribunyaviridae - family, Orthobunyavirus - genus) Jan 8, 2019
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