configuration files to be used with the qiime-deploy packages
The goal of this project is to produce an estimator for runtime and memory consumption: (runtime, memory) = f(script_name, number_of_observations, number_of_samples, sparsity). This estimator will be based off of empirical results from standard test data sets (to be created, described below) and validated with real world datasets. Once in place,…
A reference set of ITS OTUs derived from UNITE for use with QIIME
Support files for the QIIME continuous integration system.
Tool to easily install QIIME's dependencies on Linux systems
Interactive phylogenetic tree viewing software
Repository for QIIME/Galaxy integration code.
QIIME, EMP and American Gut Web Application
Experimental support for loading and interacting with QIIME files in R.
A tool for the automated testing of software using cloud-based services.
Test input and output for QIIME scripts.
Temporary repo for refactoring of parallel QIIME. This code was all merged into the main QIIME svn repository on 16 July 2012 (revision 3130). This repository is now closed for commit access - all future updates should happen in the main QIIME repository.