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BUG: Raise exception when samples in table not present in metadata #64

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Aug 8, 2019

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@Oddant1 Oddant1 commented Aug 2, 2019

Closes #25 The only relevant non-deprecated method I found for this was gradient_clustering, it now defaults to excepting if there are any samples present in the table that are not in the metadata and has an ignore_missing_samples parameter to intentionally bypass this check.

@thermokarst thermokarst added this to In Review in 2019.10 via automation Aug 3, 2019
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Thanks @Oddant1! One minor test-request, inline, otherwise GTG!

q2_gneiss/cluster/tests/test_cluster.py Show resolved Hide resolved
@thermokarst thermokarst moved this from In Review to In Development in 2019.10 Aug 8, 2019
@Oddant1 Oddant1 assigned thermokarst and unassigned Oddant1 Aug 8, 2019
@thermokarst thermokarst merged commit e558760 into qiime2:master Aug 8, 2019
2019.10 automation moved this from In Development to Changelog Needed Aug 8, 2019
@Oddant1 Oddant1 moved this from Changelog Needed to Completed in 2019.10 Aug 13, 2019
@Oddant1 Oddant1 deleted the table_samples_not_in_metadata branch June 25, 2020 20:44
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error if feature table samples aren't found in metadata
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