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Current Behavior
It's easy to miss the final line of text output by a command that describes where to find debug info (e.g. --verbose output or the debug logfile).
Current output:
$ qiime dada2 denoise-single --i-demultiplexed-seqs demux.qza --p-trim-left 0 --p-trunc-len -1 --o-representative-sequences rep-seqs-dada2.qza --o-table table-dada2.qza --p-n-threads 0
Plugin error from dada2:
Argument to 'trunc_len' was -1, should be non-negative.
Debug info has been saved to /tmp/qiime2-q2cli-err-t7y794ah.log.
$
Proposed Behavior @maxvonhippel suggested adding a trailing newline to the output to make the line easier to notice:
$ qiime dada2 denoise-single --i-demultiplexed-seqs demux.qza --p-trim-left 0 --p-trunc-len -1 --o-representative-sequences rep-seqs-dada2.qza --o-table table-dada2.qza --p-n-threads 0
Plugin error from dada2:
Argument to 'trunc_len' was -1, should be non-negative.
Debug info has been saved to /tmp/qiime2-q2cli-err-t7y794ah.log.
$
Questions
Are there other ways we can make this line easier to notice? For example, would bold and/or colored text help?
The text was updated successfully, but these errors were encountered:
Current Behavior
It's easy to miss the final line of text output by a command that describes where to find debug info (e.g.
--verbose
output or the debug logfile).Current output:
$ qiime dada2 denoise-single --i-demultiplexed-seqs demux.qza --p-trim-left 0 --p-trunc-len -1 --o-representative-sequences rep-seqs-dada2.qza --o-table table-dada2.qza --p-n-threads 0 Plugin error from dada2: Argument to 'trunc_len' was -1, should be non-negative. Debug info has been saved to /tmp/qiime2-q2cli-err-t7y794ah.log. $
Proposed Behavior
@maxvonhippel suggested adding a trailing newline to the output to make the line easier to notice:
$ qiime dada2 denoise-single --i-demultiplexed-seqs demux.qza --p-trim-left 0 --p-trunc-len -1 --o-representative-sequences rep-seqs-dada2.qza --o-table table-dada2.qza --p-n-threads 0 Plugin error from dada2: Argument to 'trunc_len' was -1, should be non-negative. Debug info has been saved to /tmp/qiime2-q2cli-err-t7y794ah.log. $
Questions
Are there other ways we can make this line easier to notice? For example, would bold and/or colored text help?
The text was updated successfully, but these errors were encountered: