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on Mac M1: Can't open lib: '...' file not found #482

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DSLituiev opened this issue Jan 29, 2022 · 4 comments
Closed

on Mac M1: Can't open lib: '...' file not found #482

DSLituiev opened this issue Jan 29, 2022 · 4 comments

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@DSLituiev
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DSLituiev commented Jan 29, 2022

Issue Description and Expected Result

While trying to connect through FreeTDS

cdw <- DBI::dbConnect(
          odbc(),
          Driver="FreeTDS",
         ...)

I am running into an error:

Error: nanodbc/nanodbc.cpp:1021: 00000: [unixODBC][Driver Manager]Can't open lib '/opt/homebrew/Cellar/freetds/1.3.6/lib/libtdsodbc.0.so' : file not found

Which is obviously not true:

/opt/homebrew/Cellar/freetds/1.3.6/lib/libtdsodbc.0.so
-r--r--r--  1 dlituiev  admin   434K Jan 28 15:52 /opt/homebrew/Cellar/freetds/1.3.6/lib/libtdsodbc.0.so

This may be related to #474, which solved first step for me.

Database

MSSQL / connection issue

Reproducible Example

> odbc::odbcListDrivers()
                           name   attribute                                                  value
1                       FreeTDS Description                                         FreeTDS Driver
2                       FreeTDS      Driver /opt/homebrew/Cellar/freetds/1.3.6/lib/libtdsodbc.0.so
3                       FreeTDS  UsageCount                                                      1
4 ODBC Driver 17 for SQL Server Description                Microsoft ODBC Driver 17 for SQL Server
5 ODBC Driver 17 for SQL Server      Driver                /opt/homebrew/lib/libmsodbcsql.17.dylib
6 ODBC Driver 17 for SQL Server  UsageCount                                                      1
Session Info
Session info ─────────────────────────────────────────────────────────────────────────────────────────────────────────────
 setting  value
 version  R version 4.1.1 (2021-08-10)
 os       macOS Big Sur 11.5.1
 system   x86_64, darwin17.0
 ui       RStudio
 language (EN)
 collate  en_US.UTF-8
 ctype    en_US.UTF-8
 tz       America/Los_Angeles
 date     2022-01-28
 rstudio  2021.09.0+351 Ghost Orchid (desktop)
 pandoc   NAPackages ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────
 package     * version date (UTC) lib source
 brio          1.1.3   2021-11-30 [1] CRAN (R 4.1.0)
 cachem        1.0.6   2021-08-19 [1] CRAN (R 4.1.0)
 callr         3.7.0   2021-04-20 [1] CRAN (R 4.1.0)
 cli           3.1.0   2021-10-27 [1] CRAN (R 4.1.0)
 crayon        1.4.2   2021-10-29 [1] CRAN (R 4.1.0)
 desc          1.4.0   2021-09-28 [1] CRAN (R 4.1.0)
 devtools    * 2.4.3   2021-11-30 [1] CRAN (R 4.1.0)
 ellipsis      0.3.2   2021-04-29 [1] CRAN (R 4.1.0)
 fastmap       1.1.0   2021-01-25 [1] CRAN (R 4.1.0)
 fs            1.5.0   2020-07-31 [1] CRAN (R 4.1.0)
 glue          1.5.0   2021-11-07 [1] CRAN (R 4.1.0)
 lifecycle     1.0.1   2021-09-24 [1] CRAN (R 4.1.0)
 magrittr      2.0.1   2020-11-17 [1] CRAN (R 4.1.0)
 memoise       2.0.1   2021-11-26 [1] CRAN (R 4.1.0)
 pkgbuild      1.3.1   2021-12-20 [1] CRAN (R 4.1.0)
 pkgload       1.2.4   2021-11-30 [1] CRAN (R 4.1.0)
 prettyunits   1.1.1   2020-01-24 [1] CRAN (R 4.1.0)
 processx      3.5.2   2021-04-30 [1] CRAN (R 4.1.0)
 ps            1.6.0   2021-02-28 [1] CRAN (R 4.1.0)
 purrr         0.3.4   2020-04-17 [1] CRAN (R 4.1.0)
 R6            2.5.1   2021-08-19 [1] CRAN (R 4.1.0)
 remotes       2.4.2   2021-11-30 [1] CRAN (R 4.1.0)
 rlang         0.4.12  2021-10-18 [1] CRAN (R 4.1.0)
 rprojroot     2.0.2   2020-11-15 [1] CRAN (R 4.1.0)
 sessioninfo   1.2.2   2021-12-06 [1] CRAN (R 4.1.0)
 testthat      3.1.2   2022-01-20 [1] CRAN (R 4.1.2)
 usethis     * 2.1.5   2021-12-09 [1] CRAN (R 4.1.0)
 withr         2.4.3   2021-11-30 [1] CRAN (R 4.1.0)

 [1] /Library/Frameworks/R.framework/Versions/4.1/Resources/library
@Worville
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Worville commented Aug 3, 2022

@DSLituiev have you found a solution here?

Have an M1 Mac and running into the same error as you and others:

[unixODBC][Driver Manager]Can't open lib '/usr/local/lib/libtdsodbc.so' : file not found

@spotamushroom
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@Worville did you figure it out? I am in the same situation as you are.

@krlmlr krlmlr added the arm64 label Dec 5, 2022
@sharon-wang
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Contributor

Seems similar to #501

From what I've seen so far, this error occurs when you have an architecture mismatch between R/RStudio and the ODBC library you have installed (i.e. x86_64 for R/RStudio, but aarch64 ODBC).

Based on your session info, it looks like you're running x86_64 R/RStudio, but based on your driver path /opt/homebrew/lib it seems like you might have the aarch64 ODBC installed. If you'd like to leave your R/RStudio untouched, you can try installing the x86_64 version of ODBC to see if that resolves the issue.

@L-Groeninger
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I can confirm @sharon-wang s solution. I followed a procedure that Scott Brenstuhl has provided in this stackoverflow answer. I also wrote a short blog post about my quest to finding this solution:)

@detule detule closed this as completed Mar 21, 2023
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