View AIBS brightfield stacks in Neuroglancer

[JohnTigue]

Cuboid Transformer is sufficient to directly view the Allen's brightfield stacks in Neuroglancer.

Sure Xformer's original goal was to get the brightfield stacks into bossDB but this is even simpler. Just drop Xformer's precomputed cuboids in S3 or GCS or Wasabi and point Neuroglancer at them.

See also #67

[oradomskyi]

Hi John, I have a pipeline for tiff to precomputed to view local tiff stack in Neuroglancer, as well as generate mesh from tiff segmentation labels.

[JohnTigue]

Hi Fraya, Excellent! Is the code available on the web?

[oradomskyi]

Hi Fraya, Excellent! Is the code available on the web?

I would update manual and keep all related files here:

https://gitlab.com/orado/em_segmentation_flood_filling/-/tree/master

[JohnTigue]

Nice work. Thanks. I just did a quick read of manual_neuroglancer. I'll give it a shot soon and report back.