Releases: reefgenomics/SymPortal_framework
v0.2.2
Improvements to relative imports and config files.
Sequence databases updated.
v0.2.1
Bug fix in the populate_db_ref_seqs.py
v0.2.0
Conforming naming systems to PEP8.
v0.1.19
Refactoring of some of the code to allow for integration within a testing framework.
Some bug fixed where dss.id was being used instead of cc.id in ordination.
v0.1.18
Bug fix where no legend would appear when plotting ITS2 type profiles if the number of ITS2 type profiles was exactly 5.
v0.1.17
I have added the option of downloading the pre-compiled phylipnew executable to the local SymPortal library rather than having to go through the option of compiling from source. Compiling these executables can be quite annoying given the dependencies. SymPortal will first check to see if you already have the phylipnew executables in your PATH. If not, then it will check in the local lib dir. If not there, an error message will be thrown and the system will exit. N.B. the phylipnew executables are only required for UniFrac-based ordinations. More details can be found in the wiki: https://github.com/didillysquat/SymPortal_framework/wiki/SymPortal-setup#6-third-party-dependencies
v0.1.16
Conversion of MED decompose code to Python3 and integration into the SP code. No need to install the med decompose anymore.
v0.1.15
Inclusion of --debug mode for increased verbosity during data set submission. Removal of some of the matplotlib imports to minimise backend bugs.
v0.1.14
tweaking of the fig output for very large datasets
v0.1.13
disallow plotting when samples > 1000. Enforce the dtype of dataframes.