Mccalluc/cypress continued

.gitignore

@@ -64,6 +64,8 @@ codekit-config.json
 /refinery/ui/.tmp/
 /refinery/ui/coverage/
 /refinery/ui/docs/
+/refinery/ui/cypress/screenshots/
+/refinery/ui/cypress/videos/
 /isa-tab/
 /import/
 /static/

.travis.yml

@@ -1,12 +1,15 @@
 sudo: required
 
 language: python
-cache: pip
 addons:
   firefox: "53.0.3"
   apt:
     packages:
       - xvfb
+cache:
+  directories:
+    - /home/travis/.cache/pip
+    - /home/travis/.cypress/Cypress
 
 python:
   - 2.7
@@ -28,6 +31,7 @@ install:
   - npm --version
 
   - pip install -r requirements.txt --quiet
+
   # Install geckodriver required for selenium testing
   - GECKODRIVER_VERSION=v0.17.0
   - TAR=geckodriver-$GECKODRIVER_VERSION-linux64.tar
@@ -40,7 +44,9 @@ env:
   global:
     # These env vars are available to every build
     - PYTHONPATH=$PYTHONPATH:../refinery:../refinery/config
-    - DJANGO_SETTINGS_MODULE=config.settings.prod
+    - DJANGO_SETTINGS_MODULE=config.settings.dev
+    # CYPRESS_RECORD_KEY:
+    - secure: oGdTYh3rnPdG7qVGYq3TgVESypir1btO2kmafumtKR6o+FYmMtb09pe+HtiT6Qfv4pDwnYZ2RTYqsTY4h6POigU5j7qQPSsZ5WkhHt9ybFyt/vfo2B95GaAIFt+8LVjTX5TItyw0/PPUCCUluQ1n8k/NCtSfMb0kIT/CuLrg7N8=
 
 before_script:
   # Vagrant is not used on travis: This user is just for the database.
@@ -59,6 +65,15 @@ before_script:
   - npm install --progress false --quiet || ( cat npm-debug.log && false )
   - bower install --config.interactive=false --quiet
   - cd ../
+
+  # Required for cypress tests; TODO: Move to puppet.
+  # TODO: Start up solr (and neo4j?)
+  - python manage.py loaddata guest.json
+  - python manage.py activate_user guest
+  - python manage.py add_users_to_public_group
+  - pushd ui && grunt make && popd
+  - python manage.py collectstatic --noinput -v 0
+  - python manage.py runserver --insecure &
 script:
   - set -e # Any error will cause travis to exit early and report a failure.
 
@@ -67,13 +82,17 @@ script:
   - flake8 --exclude=migrations,ui ..
 
   - echo 'travis_fold:start:grunt'
-  - pushd ui && grunt && popd
+  - pushd ui && grunt test && popd
   - echo 'travis_fold:end:grunt'
 
   - echo 'travis_fold:start:django-tests'
   - coverage run manage.py test
   - echo 'travis_fold:end:django-tests'
 
+  - echo 'travis_fold:start:cypress'
+  - pushd ui && node_modules/.bin/cypress run --record && popd
+  - echo 'travis_fold:end:cypress'
+
   - set +e # Currently, codecov does not always exit with 0, but that should not cause travis to fail.
 
 after_success:

deployment/refinery-modules/refinery/manifests/selenium.pp

@@ -19,4 +19,4 @@
     ensure => 'link',
     target => $install_path
   }
-}
+}

refinery/config/settings/base.py

@@ -368,6 +368,8 @@ def get_setting(name, settings=local_settings, default=None):
 # so managers and admins know Refinery is emailing them
 EMAIL_SUBJECT_PREFIX = get_setting("EMAIL_SUBJECT_PREFIX")
 
+EMAIL_BACKEND = "django.core.mail.backends.console.EmailBackend"
+
 # for system stability
 CELERYD_MAX_TASKS_PER_CHILD = get_setting("CELERYD_MAX_TASKS_PER_CHILD")
 CELERY_ROUTES = {"file_store.tasks.import_file": {"queue": "file_import"}}

refinery/config/settings/prod.py

@@ -6,6 +6,6 @@
 TEMPLATE_DEBUG = DEBUG
 
 # Required when DEBUG = False
-ALLOWED_HOSTS = get_setting("ALLOWED_HOSTS")
+ALLOWED_HOSTS = get_setting("ALLOWED_HOSTS")  # NOQA: F405
 
 EMAIL_BACKEND = "django.core.mail.backends.smtp.EmailBackend"

refinery/factory_boy/utils.py

@@ -57,14 +57,17 @@ def make_analyses_with_single_dataset(number_to_create, user_instance):
         analysis.save()
 
 
-def create_dataset_with_necessary_models(create_nodes=True):
+def create_dataset_with_necessary_models(
+        create_nodes=True, user=None, slug=None
+):
     """Create Dataset with InvestigationLink, Investigation, Study,
     and Assay"""
     dataset_uuid = str(uuid_builtin.uuid4())
     dataset = DataSetFactory(
         uuid=dataset_uuid,
         title="Test DataSet - {}".format(dataset_uuid),
-        name="Test DataSet - {}".format(dataset_uuid)
+        name="Test DataSet - {}".format(dataset_uuid),
+        slug=slug
     )
 
     investigation_uuid = str(uuid_builtin.uuid4())
@@ -107,4 +110,8 @@ def create_dataset_with_necessary_models(create_nodes=True):
                 attribute=attribute
             )
 
+    if user is not None:
+        dataset.set_owner(user)
+        dataset.save()
+
     return dataset

refinery/selenium_testing/tests.py

@@ -5,9 +5,8 @@
 from core.models import Analysis, DataSet
 from factory_boy.utils import make_analyses_with_single_dataset, make_datasets
 
-from .utils import (MAX_WAIT, SeleniumTestBaseGeneric, assert_body_text,
-                    assert_text_within_id, delete_from_ui, login,
-                    wait_until_class_visible, wait_until_id_clickable,
+from .utils import (MAX_WAIT, SeleniumTestBaseGeneric, assert_text_within_id,
+                    delete_from_ui, login, wait_until_id_clickable,
                     wait_until_id_visible)
 
 
@@ -32,91 +31,7 @@ def setUp(self, site_login=True, initialize_guest=True,
             create_public_group()
 
 
-class NoLoginTestCase(RefinerySeleniumTestBase):
-    """
-    Ensure that Refinery looks like it should when there is no currently
-    logged in user
-    """
-
-    # RefinerySeleniumTestBase.setUp(): We don't need to login or
-    # initialize the guest user this time
-    def setUp(self, site_login=True, initialize_guest=True,
-              public_group_needed=False):
-        super(NoLoginTestCase, self).setUp(initialize_guest=False,
-                                           site_login=False)
-
-    def test_login_not_required(self):
-        self.browser.get(self.live_server_url)
-        assert_body_text(
-            self.browser,
-            search_array=['Collaboration', 'Statistics', 'About',
-                          'Register', 'Login', 'Launch Pad', 'Data Sets',
-                          'Analyses', 'Workflows']
-        )
-
-        self.browser.find_element_by_link_text('Statistics').click()
-        assert_body_text(
-            self.browser,
-            search_array=[
-                'Users',
-                'Groups',
-                'Files',
-                'Data Sets',
-                'Workflows',
-                'Projects'
-            ]
-        )
-
-        self.browser.find_element_by_link_text('About').click()
-        assert_body_text(self.browser,
-                         search_array=['Background', 'Contact', 'Funding',
-                                       'Team',
-                                       'Most Recent Code for this Instance'])
-        # TODO: All sections are empty right now
-
-
-class DataSetsPanelTestCase(RefinerySeleniumTestBase):
-    """
-    Ensure that the DataSet upload button and DataSet Preview look like
-    they're behaving normally
-    """
-
-    def test_data_set_preview(self):
-        """Test DataSet Preview"""
-
-        # Create sample Data & refresh page
-        make_analyses_with_single_dataset(5, self.user)
-
-        wait_until_class_visible(self.browser, "title", MAX_WAIT)
-        self.browser.find_elements_by_class_name("title")[0].click()
-
-        search_array = ["SUMMARY", "Description",
-                        "Number of files (total file size)", "Owner",
-                        "ANALYSES", "REFERENCES", "PROTOCOLS",
-                        ]
-        for item in Analysis.objects.filter(name__startswith="Test Analysis"):
-            search_array.append(item.name)
-
-        assert_body_text(self.browser, search_array)
-
-    def test_upload_button(self):
-        """Test Upload button"""
-
-        wait_until_id_clickable(self.browser, "import-button",
-                                MAX_WAIT).click()
-        assert_body_text(
-            self.browser,
-            search_array=[
-                "Data Set Import",
-                "Tabular Metadata",
-                "ISA-Tab Metadata",
-                "PROVIDE METADATA FILE",
-                "Download an example tabular metadata file.",
-                "Must contain column headers in the first row of the table"]
-        )
-
-
-class UiDeletionTestCase(RefinerySeleniumTestBase):
+class UiDeletionTestCase(RefinerySeleniumTestBase):  # TODO: Replace w/ Cypress
     """Ensure proper deletion of DataSets and Analyses from the UI"""
 
     def test_dataset_deletion(self, total_datasets=2):

refinery/tool_manager/tests.py

@@ -2662,7 +2662,7 @@ def test_workflow_tool_analysis_name(self):
         )
 
 
-class VisualizationToolLaunchTests(ToolManagerTestBase,
+class VisualizationToolLaunchTests(ToolManagerTestBase,  # TODO: Cypress
                                    SeleniumTestBaseGeneric):
     def setUp(self):
         # super() will only ever resolve a single class type for a given method

refinery/ui/cypress.json

@@ -0,0 +1,4 @@
+{
+  "baseUrl": "http://127.0.0.1:8000",
+  "projectId": "odo3mu"
+}

refinery/ui/cypress/fixtures/api-v1-data_sets-assays.json

@@ -0,0 +1,13 @@
+{
+  "meta": {
+    "total_count": 1
+  },
+  "objects": [
+    {
+      "id": 28,
+      "measurement": null,
+      "technology": null,
+      "uuid": "7c532f21-d4c4-40da-83c4-9a72ade5c80f"
+    }
+  ]
+}

refinery/ui/cypress/fixtures/api-v1-data_sets-sharing.json

@@ -0,0 +1,14 @@
+{
+  "owner": "9bf8da15-9688-4965-aa69-9ed4c31fef83",
+  "share_list": [
+    {
+      "group_id": 189,
+      "group_name": "group_1508275589185",
+      "group_uuid": "9acd285d-2599-4c13-a51f-b42551904cb3",
+      "perms": {
+        "change": false,
+        "read": false
+      }
+    }
+  ]
+}