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Scottx611x/fix management commands #2606

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merged 5 commits into from Feb 20, 2018

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codecov bot commented Feb 20, 2018

Codecov Report

Merging #2606 into jkmarx/django-upgrade-1.8 will decrease coverage by 1.4%.
The diff coverage is 97.36%.

Impacted file tree graph

@@                      Coverage Diff                      @@
##           jkmarx/django-upgrade-1.8    #2606      +/-   ##
=============================================================
- Coverage                      56.22%   54.82%   -1.41%     
=============================================================
  Files                            400      400              
  Lines                          26499    25670     -829     
  Branches                        1240     1240              
=============================================================
- Hits                           14900    14073     -827     
+ Misses                         11599    11597       -2
Impacted Files Coverage Δ
refinery/core/tests.py 99.49% <100%> (-0.34%) ⬇️
...inery/core/management/commands/set_up_site_name.py 91.3% <87.5%> (+13.52%) ⬆️

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@jkmarx jkmarx merged commit 24fa9f4 into jkmarx/django-upgrade-1.8 Feb 20, 2018
@jkmarx jkmarx deleted the scottx611x/fix-management-commands branch February 20, 2018 17:35
scottx611x pushed a commit that referenced this pull request Feb 21, 2018
* Upgrade django version to 1.8

* Update workflow_manager httpReponse to jsonReponse.

* Add allowed_hosts to dev setting.

* Update comment.

* Remove conflicting settings, model can only have one of add, add_on, or default.

* Update analysis_manager httpReponse to jsonResponse.

* Add migrations.

* Update module_name with model name.

* Refactor.

* Upgrade some dependencies for django 1.8

* Revert to minimum dependency upgrade to resolve migration issue.

* Update annotation server with jsonResponse.

* Update core and data_set_manager apps.

* Fix typo.

* Update requirements to fix migration issue.

* Try release which seperates dependency on User module.

* Check to see if chunked-upload is the problem.

* Fix bug related to abstract model causing migration to fail for library.

* Remove duplicate setting.

* Track migration until library updates

* Reorder installed apps per redux docs.

* Update activate_user with parser.

* Fix pep8 in migration.

* Remove unit test due to inaccurate scope.

* Add mocks to unit test.

* Remove unneccessary deletion.

* Fix selium unit test errors.

* Remove accidently added json

* Jkmarx/registration redux upgrade (#2562)

* update redux.

* Update method params changed from upgrade

* Update flockblock params due to upgrade.

* Refactor, return_value to inline.

* Fix unit test.

* Fix mistake using jsonresponse with a str.

* Remove typo.

* Remove unneeded field.

* Chunked_upload migration.

* Opt for safer option for jsonResponse.

* Fix syntax.

* Fix pep8.

* Swap deprecated method out. (#2566)

* Swap deprecated method out.

* Remove solr_igv dependencies. (#2570)

* Remove solr_igv dependencies.

* Remove visualization_manager.

* Upgrade django storage. (#2571)

* Upgrade django storage.

* Remove post-css library, unused. (#2574)

* Update user/file facet/columns per user request. (#2577)

* Remove post-css library, unused.

* Update user/file facet/columns per user request.

* Remove typo ,

* Fix typo, double quotes.

* Remove space.

* Add cell_type to facets.

* Fix unit test.

* Add missing facets.

* Fix cypress test.

* Revert to 1.6.0 due to django 1.9 support.

* Remove unnessary flake8 ignore.

* Add json.load exception.

* Jkmarx/update httpresponse (#2533)

* Update workflow_manager httpReponse to jsonReponse.

* Add allowed_hosts to dev setting.

* Update comment.

* Remove conflicting settings, model can only have one of add, add_on, or default.

* Update analysis_manager httpReponse to jsonResponse.

* Add migrations.

* Update module_name with model name.

* Refactor.

* Upgrade some dependencies for django 1.8

* Revert to minimum dependency upgrade to resolve migration issue.

* Update annotation server with jsonResponse.

* Update core and data_set_manager apps.

* Fix typo.

* Update requirements to fix migration issue.

* Try release which seperates dependency on User module.

* Check to see if chunked-upload is the problem.

* Fix bug related to abstract model causing migration to fail for library.

* Remove duplicate setting.

* Track migration until library updates

* Reorder installed apps per redux docs.

* Update activate_user with parser.

* Fix pep8 in migration.

* Remove unit test due to inaccurate scope.

* Add mocks to unit test.

* Remove unneccessary deletion.

* Fix selium unit test errors.

* Remove accidently added json

* Jkmarx/registration redux upgrade (#2562)

* update redux.

* Update method params changed from upgrade

* Update flockblock params due to upgrade.

* Refactor, return_value to inline.

* Fix unit test.

* Fix mistake using jsonresponse with a str.

* Remove typo.

* Remove unneeded field.

* Chunked_upload migration.

* Opt for safer option for jsonResponse.

* Fix syntax.

* Fix pep8.

* Swap deprecated method out. (#2566)

* Swap deprecated method out.

* Remove solr_igv dependencies. (#2570)

* Remove solr_igv dependencies.

* Remove visualization_manager.

* Upgrade django storage. (#2571)

* Upgrade django storage.

* Remove post-css library, unused. (#2574)

* Update user/file facet/columns per user request. (#2577)

* Remove post-css library, unused.

* Update user/file facet/columns per user request.

* Remove typo ,

* Fix typo, double quotes.

* Remove space.

* Add cell_type to facets.

* Fix unit test.

* Add missing facets.

* Fix cypress test.

* Revert to 1.6.0 due to django 1.9 support.

* Remove unnessary flake8 ignore.

* Add json.load exception.

* Jkmarx/remove unused m commands (#2583)

* Remove unused management commands.

* Remove unused method.

* Jkmarx/outparse to argparse (#2584)

* Update make_options to add_arguments for optparse/argparse upgrade.

* Refactor for easier read.

* Jkmarx update deprecated 1 8 items (#2588)

* Update config with the new 1.8 setting.

* Add comment.

* Remove unused template.

* Update template related settings.

* Update get_template per docs, Context&RequestContext unneeded.

* Fix typo in context_processors location update.

* Remove duplicate.

* Fix added setting.

* Add `--fake-initial` to our migrate commands to provide the behavior that Django 1.7 gave by default (#2585)

* Update management command, argparse.

* Scottx611x/fix management commands (#2606)

* Update `set_uo_site_name` to use add_arguments()

* Add test coverage

* Add test for `add_users_to_public_group`

* Add test for user activation

* Add test for `import_annotations`

* Move for consistency.

* Jkmarx/update management command argparse (#2607)

* Update management command, argparse.

* Move for consistency.

* Add tests for `create_workflow_engine`

* Add tests for `create_galaxy_instance`

* Fix bug related to non-obj.
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