forked from biokit/biokit
-
Notifications
You must be signed in to change notification settings - Fork 0
/
setup.py
executable file
·94 lines (79 loc) · 2.98 KB
/
setup.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
# -*- coding: utf-8 -*-
__revision__ = "$Id$"
import sys
import os
from setuptools import setup, find_packages
import glob
_MAJOR = 0
_MINOR = 4
_MICRO = 2
version = '%d.%d.%d' % (_MAJOR, _MINOR, _MICRO)
release = '%d.%d' % (_MAJOR, _MINOR)
metainfo = {
'authors': {
'Cokelaer':('Thomas Cokelaer','cokelaer@gmail.com'),
},
'version': version,
'license' : 'BSD',
'download_url' : ['http://pypi.python.org/pypi/biokit'],
'url' : ['http://pypi.python.org/pypi/biokit'],
'description':'Access to Biological Web Services from Python' ,
'platforms' : ['Linux', 'Unix', 'MacOsX', 'Windows'],
'keywords' : ['corrplot', 'heatmap'],
'classifiers' : [
'Development Status :: 1 - Planning',
'Intended Audience :: Developers',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: BSD License',
'Operating System :: OS Independent',
'Programming Language :: Python :: 2.7',
'Topic :: Software Development :: Libraries :: Python Modules',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'Topic :: Scientific/Engineering :: Information Analysis',
'Topic :: Scientific/Engineering :: Mathematics',
'Topic :: Scientific/Engineering :: Physics']
}
with open('README.rst') as f:
readme = f.read()
from distutils.core import setup, Extension
sequence = Extension('sequence', sources=['biokit/sequence/sequence.c'])
setup(
name = 'biokit',
version = version,
maintainer = metainfo['authors']['Cokelaer'][0],
maintainer_email = metainfo['authors']['Cokelaer'][1],
author = metainfo['authors']['Cokelaer'][0],
author_email = metainfo['authors']['Cokelaer'][1],
long_description = readme,
keywords = metainfo['keywords'],
description = metainfo['description'],
license = metainfo['license'],
platforms = metainfo['platforms'],
url = metainfo['url'],
download_url = metainfo['download_url'],
classifiers = metainfo['classifiers'],
zip_safe=False,
packages = find_packages(),
# package installation
#package_dir = package_dir,
#packages = ['biokit'],
#package_dir = package_dir,
# distutils in rtools.package
# suds-jurko is used by bioservices so we probab ly do not need it in the
# setup.
install_requires = ['easydev>=0.9.11', "suds-jurko", 'pandas',
'bioservices>=1.4.5', 'colormap', 'scipy', "biopython", "matplotlib",
"numpydoc", "colorlog", "pyyaml"],
# This is recursive include of data files
exclude_package_data = {"": ["__pycache__"]},
package_data = {
'': ['*.csv'],
'biokit.data' : ['*csv'],
'biokit.data.converters' : ['*']
},
entry_points = {
'console_scripts':[
'converter=biokit.scripts.converter:main'
]
}
)