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Binaries belong to many different Linux flavours, do not run on CentOS 6 #12

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gshamov opened this issue Jan 17, 2019 · 0 comments
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@gshamov
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gshamov commented Jan 17, 2019

Hi,

This Molprobity distribution comes with ./bin directory populated with binaries. The are not getting rebuilt with configure script.

I have found that some of these are not runnable on CentOS6 for missing dependencies/ too new glibc/ being 32bit intel-compiled. They give the following errors:

$> ./dang
./dang: error while loading shared libraries: libstdc++-libc6.2-2.so.3: cannot open shared object file: No such file or directory

$> ./gawk
./gawk: /lib64/libc.so.6: version GLIBC_2.14' not found (required by ./gawk) ./gawk: /lib64/libc.so.6: version GLIBC_2.15' not found (required by ./gawk)

$> ./genContour
(Gives weird Intel compiler suite erorr; likely misses Intel-32bit runtime that we do not provide)

Would it make sense/be possible to provide sources for these tools in MolProbity distribution, so that the binaries could be rebuilt as part of the configuration/build process?

Grigory Shamov

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