.github/workflows/docker.yml: Interrupt the build before the 6 hour cancellation #36670
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Is this for workflow that is canceled by timeout? Does this allow to investigate the image (with |
Yes, the main use case is for debugging these timeouts. But I could also imagine using it to get earlier access to the image of a failing build. |
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Thanks... but it wasn't ready for review; it doesn't work yet |
Ah, sorry.
The code doesn't work? Or do you plan to do more? |
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This approach works locally as described, but in GH Actions the runner dies too quickly. I'll have to make changes and experiments |
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Isn't |
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It's possible that I may be making a stupid mistake in setting up the trap in this step. I cannot see any sign of it being triggered. Help with this is very welcome! |
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I've switched to a simpler approach, suitable for the main use case. |
kwankyu
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Thanks! |
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Rebased onto the proper rc2. |
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Setting to blocker because there are more build hangs, possibly from contourpy, in https://github.com/sagemath/sage/actions/runs/6842945144/job/18611623959#step:11:1932, https://github.com/sagemath/sage/actions/runs/6842945144/job/18611622942#step:11:2109, https://github.com/sagemath/sage/actions/runs/6842945144/job/18611624721 |
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Documentation preview for this PR (built with commit 7df3b63; changes) is ready! 🎉 |
This was referenced Nov 14, 2023
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
vbraun
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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Follow-up after: - sagemath#36670 This is working well, for example see https://github.com/mkoeppe/sage/ac tions/runs/6874334523/job/18695809308#step:11:5345, making it possible to obtain the image of the hanging build - https://github.com/mkoeppe/sa ge/actions/runs/6874334523/job/18695809308#step:15:25 However, `pkill` is not present on many of our `-minimal` configurations (which test our documented minimal build prerequisites). For example `debian-sid-minimal`, as seen in https://github.com/mkoeppe/sage/actions /runs/6874334523/job/18695811066#step:11:2262, rendering the mechanism ineffective there. (Neither are `ps` and `killall`.) Examples: - `docker run -it ghcr.io/sagemath/sage/sage-debian-bookworm-minimal- with-system-packages:dev bash -c "command -v pkill" ` - `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-minimal-with- system-packages:dev bash -c "command -v pkill"` - whereas `docker run -it ghcr.io/sagemath/sage/sage-fedora-38-standard- with-system-packages:dev bash -c "command -v pkill" ` --> `/usr/bin/pkill`. We replace `pkill` by more primitive means. Test run (with timeout set to ~11 minutes for testing purposes): https:/ /github.com/mkoeppe/sage/actions/runs/6883232154/job/18723359505#step:15 :25 <!-- ^^^^^ Please provide a concise, informative and self-explanatory title. Don't put issue numbers in there, do this in the PR body below. For example, instead of "Fixes sagemath#1234" use "Introduce new method to calculate 1+1" --> <!-- Describe your changes here in detail --> <!-- Why is this change required? What problem does it solve? --> <!-- If this PR resolves an open issue, please link to it here. For example "Fixes sagemath#12345". --> <!-- If your change requires a documentation PR, please link it appropriately. --> ### 📝 Checklist <!-- Put an `x` in all the boxes that apply. --> <!-- If your change requires a documentation PR, please link it appropriately --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> <!-- Feel free to remove irrelevant items. --> - [x] The title is concise, informative, and self-explanatory. - [x] The description explains in detail what this PR is about. - [x] I have linked a relevant issue or discussion. - [ ] I have created tests covering the changes. - [ ] I have updated the documentation accordingly. ### ⌛ Dependencies <!-- List all open PRs that this PR logically depends on - sagemath#12345: short description why this is a dependency - sagemath#34567: ... --> <!-- If you're unsure about any of these, don't hesitate to ask. We're here to help! --> URL: sagemath#36726 Reported by: Matthias Köppe Reviewer(s): Kwankyu Lee, Nathan Dunfield, William Stein
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When a CI Linux workflow is canceled, because we are using
docker build, no image is written out.Here we add an input parameter
timeout, defaulting to 5.5 hours, after which we kill themakeprocess inside of the build container.Then our script (in tox) writes out and pushes an image (marked as "-failed") to ghcr.io, enabling better diagnostics.
See https://github.com/mkoeppe/sage/actions/runs/6831246509/job/18580446041 for a test run where for demonstration purposes I set the timeout to 6 minutes.
📝 Checklist
⌛ Dependencies