Skip to content

2.4.0

Compare
Choose a tag to compare
@droazen droazen released this 27 May 20:21
· 650 commits to master since this release

The major change in this release is the switch to using gradle as a build system. The old ant build file, if run, now just emits a set of instructions on using gradle. There was also some minor cleanup and bug fixing. Full changelist is below:

9e166bc Switch to using the Intel GKL (Genomics Kernel Library) to pull down the Intel deflater, and remove the checked-in copy
841e47f Remove the ".dirty" from htsjdk jar names
00344d1 fix cram bzip2 ExternalCompression and clean dependencies
00f06a7 add coverage reports, online and offline. Add coveralls badge and text to readme
d604a1b Changed VariantContextBuilder.attributes() to copy the supplied map in order to avoid: (#587)
25e9174 removing automatic determination of isRelease
1d052a3 converting to build using gradle
909381a moved all files into new gradle structure
954eb01 remove AsynchronousLineReader and LineReaderUtil. Created SynchronousLineReader and converted code to us it
b126640 Add a backward compatibility checkbox to the PR template.