You're missing some Perl dependancies

[mscook]

Installation using -

Installation - With bundled binaries instructions.

You list -

cpanm Array::Utils BioPerl Exception::Class File::Find::Rule File::Grep File::Slurp::Tiny Graph Moose Moose::Role Text::CSV

On a fresh install of Ubuntu 14.04 you also need -
Log::Log4perl
File::Which

[andrewjpage]

Thanks a million for letting me know. I've updated the readme and the website with the extra dependancies.
Andrew

[mscook]

No problem. We have had best success with the Ubuntu/Debian instructions
(using a blank Ubuntu 14.04 VM spun up via vagrant) BUT we need to force
install due to failed BioPerl test failures.

On Fri, May 15, 2015 at 5:44 PM, andrewjpage notifications@github.com
wrote:

Thanks a million for letting me know. I've updated the readme and the
website with the extra dependancies.
Andrew

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Reply to this email directly or view it on GitHub
#123 (comment)
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Mitchell Jon Stanton-Cook https://github.com/mscook (@mscook)

Teaching Fellow &
Software Engineer/System Administrator
Beatson Microbial Genomics Group http://beatsonlab.com
University of Queensland

Brisbane, Australia

Software Carpentry Workshop
Lead Instructor

UQ Bootcamp 02-03 July 2015 http://bio-swc-bne.github.io/2015-07-02-UQ/

Co-organiser
2015 HealthHack Brisbane

October 23-24-25 2015 http://www.healthhack.com.au

[andrewjpage]

Thanks for letting me know.
Andrew

On 15 May 2015 at 10:56, Mitchell J Stanton-Cook notifications@github.com
wrote:

No problem. We have had best success with the Ubuntu/Debian instructions
(using a blank Ubuntu 14.04 VM spun up via vagrant) BUT we need to force
install due to failed BioPerl test failures.

On Fri, May 15, 2015 at 5:44 PM, andrewjpage notifications@github.com
wrote:

Thanks a million for letting me know. I've updated the readme and the
website with the extra dependancies.
Andrew

—
Reply to this email directly or view it on GitHub
<
#123 (comment)

.

Mitchell Jon Stanton-Cook https://github.com/mscook (@mscook)

Teaching Fellow &
Software Engineer/System Administrator
Beatson Microbial Genomics Group http://beatsonlab.com
University of Queensland

Brisbane, Australia

Software Carpentry Workshop
Lead Instructor

UQ Bootcamp 02-03 July 2015 http://bio-swc-bne.github.io/2015-07-02-UQ/

Co-organiser
2015 HealthHack Brisbane

October 23-24-25 2015 http://www.healthhack.com.au

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Reply to this email directly or view it on GitHub
#123 (comment)
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[tseemann]

@mscook What BioPerl test failures were you getting?