EPIC:- DPL-678 - Bioscan - Creation of asynchronous job to generate the compound sample, the mBrave file and write an export to traction message onto RabbitMQ

[andrewsparkes]

User story
As PSD we need to create a Sequencescape job to perform the steps required to generate a compound sample and mBrave file from the samples in the XP tube, and to write an export message to pass the tube and compound sample info to Traction.

Who are the primary contacts for this story
Andrew S
Harriet C

Who is the nominated tester for UAT
TBC

Acceptance criteria
To be considered successful the solution must allow:

• triggering of the job from a Limber view (see research story here)
• fetching the sample information for the XP tube
• creation of a compound sample
• creation of the mBrave file
• creation of the RabbitMQ message for export of the tube and compound sample into Traction
• updating the tube state (or export state) with progress and additionally any error messages if fails, and possible adding log comments to XP tube

Dependencies
This story is blocked by the following dependencies:

• DPL-677 - Bioscan - Research how to trigger creation of an asynchronous Sequencescape job from Limber #3753

Sub-tasks
This EPIC has the following sub-tasks:

• Y24-016 Validate that the TOL consumer can handle Traction API being unavailable tol-lab-share#70
• Y24-017 Create an architectural plan/diagram for messages involved in passing Pool XP tubes to Traction General-Backlog-Items#374
• Y24-018 Validate that an API endpoint can place a compound sample tube as a library traction-service#1255
• DPL-1103 - Investigate moving TOL schemas to Heron RedPanda General-Backlog-Items#370
• Y24-033 Fully set up a new instance of RedPanda schema registry with all existing schemas populated General-Backlog-Items#377
• Y24-019 Design a message format for adding Pool XP tubes to Traction Service tol-lab-share#71
• Y24-020 Add relevant exchanges, queues, users, etc. to RabbitMQ for new Bioscan messages tol-lab-share#72
• Y24-110: Update TOL lab share to support consuming multiple RabbitMQ queues tol-lab-share#102
• Y24-021 Update the message consumer to process Bioscan messages and pass the request to Traction Service tol-lab-share#73
• Y24-022 Add new UI for submitting the Pool XP tube to Traction limber#1617

Additional context
As input we probably just need to know the XP tube id.
As we need the 9216 samples for both the compound sample creation and the mBrave file creation it makes sense to fetch those once.