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https://github.com/Saoge123/ccgnet #5
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Hi sutapaucd, Using the example table and files as input to Predict.py in CCGnet-OB showed "AttributeError: 'NoneType' object has no attribute 'keys'". I tried to trace source code and input file. Input data can be opened at initial code of "class Dataset(object)". I do not know why the data structure seems empty at "make_graph_dataset". Do you have any ideas about what's going on? |
Hi: |
Hi,
Even I use ccgnet-ob, I got the same attibute none type error.
Thanks.
…On Wed, 21 Jun 2023, 07:27 Saoge123, ***@***.***> wrote:
Hi:
I am sorry for the late replay. We recommand to use the codes in origin
ccgnet instead of ccgnet-OB, because the ccgnet-OB can not reproduce the
results in the artical. You can try using the predict.py in origin ccgnet
to the ccgnet-OB. Please contact us if you have any questions.
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Hi, so which version of ccdc python api is compatiable with ccgnet. |
Which version of ccdc python api is compatible with ccgnet?
…On Wed, 21 Jun 2023, 07:29 sutapa dutta, ***@***.***> wrote:
Hi,
Even I use ccgnet-ob, I got the same attibute none type error.
Thanks.
On Wed, 21 Jun 2023, 07:27 Saoge123, ***@***.***> wrote:
> Hi:
> I am sorry for the late replay. We recommand to use the codes in origin
> ccgnet instead of ccgnet-OB, because the ccgnet-OB can not reproduce the
> results in the artical. You can try using the predict.py in origin ccgnet
> to the ccgnet-OB. Please contact us if you have any questions.
>
> —
> Reply to this email directly, view it on GitHub
> <#5 (comment)>,
> or unsubscribe
> <https://github.com/notifications/unsubscribe-auth/A75IDO6NHRMIVIUHKZZESF3XMJIKFANCNFSM6AAAAAAY5S6TBU>
> .
> You are receiving this because you authored the thread.Message ID:
> ***@***.***>
>
|
ccgnet use the 2021 version of CSD,so you can find the corresponding version of ccdc.
…---Original---
From: ***@***.***>
Date: Wed, Jun 21, 2023 17:20 PM
To: ***@***.***>;
Cc: ***@***.******@***.***>;
Subject: Re: [Saoge123/ccgnet] https://github.com/Saoge123/ccgnet (Issue #5)
Which version of ccdc python api is compatible with ccgnet?
On Wed, 21 Jun 2023, 07:29 sutapa dutta, ***@***.***> wrote:
> Hi,
> Even I use ccgnet-ob, I got the same attibute none type error.
> Thanks.
>
> On Wed, 21 Jun 2023, 07:27 Saoge123, ***@***.***> wrote:
>
>> Hi:
>> I am sorry for the late replay. We recommand to use the codes in origin
>> ccgnet instead of ccgnet-OB, because the ccgnet-OB can not reproduce the
>> results in the artical. You can try using the predict.py in origin ccgnet
>> to the ccgnet-OB. Please contact us if you have any questions.
>>
>> —
>> Reply to this email directly, view it on GitHub
>> <#5 (comment)>,
>> or unsubscribe
>> <https://github.com/notifications/unsubscribe-auth/A75IDO6NHRMIVIUHKZZESF3XMJIKFANCNFSM6AAAAAAY5S6TBU>
>> .
>> You are receiving this because you authored the thread.Message ID:
>> ***@***.***>
>>
>
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You are receiving this because you commented.Message ID: ***@***.***>
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Hi,
In CCGnet-OB directory, I was trying to execute predict.py. However, I got the following error:
File "predict.py", line 99, in make_graph_dataset
self.data_attr_names = D[0].keys()
AttributeError: 'NoneType' object has no attribute 'keys'
Also, I am using ccgnet-main/data/Test/Test_Table.tab and ccgnet-main/data/Test/coformers as pwd of input files.
If you could please suggest probable solution.
Thanks.
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